Cupriavidus necator H16: H16_B1235
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Entry
H16_B1235 CDS
T00416
Symbol
hupB3
Name
(GenBank) DNA-binding protein HU family
KO
K03530
DNA-binding protein HU-beta
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reh03032
]
H16_B1235 (hupB3)
03036 Chromosome and associated proteins [BR:
reh03036
]
H16_B1235 (hupB3)
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_B1235 (hupB3)
DNA replication proteins [BR:
reh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H16_B1235 (hupB3)
Chromosome and associated proteins [BR:
reh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H16_B1235 (hupB3)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H16_B1235 (hupB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_HYPK
FIMAH
HU-CCDC81_euk_1
DUF6849
Motif
Other DBs
NCBI-ProteinID:
CAJ96025
UniProt:
Q0K1U9
LinkDB
All DBs
Position
2:1395887..1396168
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AA seq
93 aa
AA seq
DB search
MNKGELVSAIAAEAELSNAAAERALNAALDSIKKAVAKGDSVTLVGFGSFSAGKRAARTG
RNPRTGETIKIPAAKTVKFSAGQGFKDAVNKKK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggtgaactggtatcggccatcgccgcggaagcagaactgagcaatgccgcc
gccgagcgcgcgctcaacgcagcgctggacagtatcaagaaggcagtggcaaagggcgat
tcggtgacgctggtgggctttggcagcttcagcgccggcaaacgcgccgcccgcaccggc
cgcaatccgcgcaccggtgaaaccatcaagatcccggccgccaagacggtcaagttctct
gccgggcagggtttcaaggacgcggtgaacaagaagaagtaa
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