KEGG   Cupriavidus necator H16: H16_B2428
Entry
H16_B2428         CDS       T00416                                 
Symbol
clpB2
Name
(GenBank) ATP-dependent protease Clp, ATPase subunit
  KO
K11907  type VI secretion system protein VasG
Organism
reh  Cupriavidus necator H16
Pathway
reh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:reh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H16_B2428 (clpB2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:reh02044]
    H16_B2428 (clpB2)
Secretion system [BR:reh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H16_B2428 (clpB2)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 Clp_N AAA_16 NBD_SMAX1 TniB AAA_7 Zeta_toxin Sigma54_activat nSTAND3 NACHT AAA_29 AAA_25 DUF815 T2SSE AAA_33 SRP54 Mg_chelatase DUF5965 CxC7 Hpr_kinase_C AAA_27 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: CAJ97210
UniProt: Q0JYG4
LinkDB
Position
2:complement(2740820..2743540)
AA seq 906 aa
MDIDIRTLLSRLNPECRHAMEQAAQLCVRQTHYSVDVEHLLLQLLEGGATDLQAILAHFD
LAPAQVVSQLQKAIDGFKRGNGRTPALSPNFSPLFQEAWLLSSMLLGEQQVRAGTLLLAL
LEVESLRGMLLESAPALLRIPRAALREALPALLGASAVGGGPGTDAIPAAAATPAFGMPQ
RGPGSGQASALEQFTVDLTALARAGAIDPVRGRDSEIRQLIDVLLRRRQNNPILTGEAGV
GKTAVVEGFAQRIVSGDVPPALRQVSVRSLDLALLQAGAGVKGEFENRLKSVIAEVAASP
VPVILFIDEAHQLIGAGGSEGQGDAANLLKPALARGELRTIAATTWAEYKKYIERDPALA
RRFQIVKVDEPAEAAAVDMLRGMVRKLEAHHGVEILDDAVRDAVKLSHRYVSGRQLPDKA
ISVLDTACARVAAAQSGVPEAIEALGRSIESAENQLRILRHEAATGTGRADEIAAVTRQR
DEARAQHARLSDKLATEKLAVEEILAWRRRIAAFLEKESQAEAGADGVARHEDDDNADSA
ESLGASLARLEKGLEAVQNDEPMVPVCVDSAAVAEVISGWTGVPVGRMLADELHTVLYLQ
DKLGERVVGQDEALDAIARRIRTFRADLDDPGKPVGVFLLVGPSGVGKTETAHALADLLY
GGERNMITVNMSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLDEMEKAH
PDVLELFFQVFDKGVMEDGEGVPIDFRNTVILLTSNAAQDVITEASRGGRRPPPQELVEK
LRPALLRQFSPAFLARLVLVPYYHLGDAQIRNIVDLKLARLAQRFARNHNARLSWDEALA
QAITQRCTEVDSGARNVDHILTQSVLPELARRVLEQLSISEPFGGVHLSLDTGGGVAFRF
LPQAGC
NT seq 2721 nt   +upstreamnt  +downstreamnt
atggacatcgatatccgcacgctgctcagccgcctcaatcccgagtgccggcacgcgatg
gagcaggccgcccagctttgcgtccggcagacgcactacagcgtcgacgtcgagcacctg
ctgctgcaattgctggaaggcggcgccacggacctgcaggcgatcctcgcgcacttcgac
ctggcgcccgcgcaggtggtgtcgcagctgcagaaggcgatcgacggcttcaagcgcggc
aacggccgcacgccggcgctgtcgcctaacttctcgccgctgttccaggaggcctggctg
ctcagttcgatgctgctcggcgagcagcaagtgcgcgccggcacgctgctgctggcactg
ctggaggtggaaagcctgcgcggcatgctgctggaatcggcgccggcgctgctgcggatt
ccgcgtgcggcgctgcgcgaggccctgcccgcgctgctgggggcatccgccgttggcggc
gggcccggaaccgatgcaatcccggcagcggcggccacgccagcgttcggcatgccgcag
cgcggacccggcagcgggcaggcatcggcgctggagcagttcactgtcgacctgacggcg
ctggcgcgagccggagcgatcgatccggtgcgcgggcgcgacagtgaaatccggcaactg
atcgatgtgctgctgcgccgccgccagaacaacccgatcctgaccggcgaggccggcgtg
ggcaagaccgcggtggtcgaaggctttgcccagcgcatcgtctccggcgacgtgccgccg
gcgctgcgccaagtgtcggtgcgctcgctggacctggcgttgctgcaggccggcgccggc
gtcaagggcgagttcgagaaccggctcaagtccgtgatcgccgaggtggcggcctcgccg
gtgccggtgatcctgtttatcgacgaagcgcaccagctgattggcgccggcggcagcgaa
gggcagggcgatgccgccaacctgctcaagcccgcgctggcgcgcggcgagttgcgcacc
attgccgcgaccacctgggccgagtacaagaagtacatcgagcgcgacccagcgctcgcg
cgccgcttccagatcgtcaaggtggacgagccggccgaggccgcggccgtggacatgctg
cgcggcatggtgcgcaagcttgaagcgcaccacggcgtggagatcctcgacgacgccgtg
cgcgacgcggtcaagctttcgcaccgctatgtctcgggccggcagttgcccgacaaggcc
atcagcgtgctcgacaccgcctgcgcccgcgtggcggccgcgcagagcggcgtgcccgag
gcgatcgaagcgcttgggcgctcgatcgaaagcgccgagaaccagctgcgcatcctgcgc
catgaggcggccaccggcaccgggcgcgccgacgaaatcgctgccgtcacgcgccagcgc
gacgaagcccgggcgcagcacgcgcggctcagcgacaagctcgccaccgagaagctggcc
gtcgaggaaatcctggcctggcgccgccggatcgcggcgttcctcgagaaggagagccag
gccgaggccggtgccgacggtgtggcgaggcatgaggacgacgacaacgccgacagcgcg
gagtcgcttggcgccagtctcgcgcgcctggaaaaaggcctggaggcggtgcagaacgat
gagccgatggtgccggtatgcgtggactcggccgcagtggccgaggtcatttcgggatgg
accggtgtcccggtcggccgcatgctggccgacgaactgcacacggtgctgtacctccag
gacaagctcggcgagcgcgtggtgggccaggacgaggccctcgacgcgatcgcgcgccgc
atccgcacgttccgcgccgatctcgatgacccgggcaagccggtcggcgtgttcctgctg
gtcggcccgagcggcgtcggcaagaccgagaccgcgcatgcgctggccgacctgctctac
ggcggcgaacgcaacatgatcacggtcaacatgtcggagttccaggaggcccacagcgtg
tcgggcctgaagggcgcgccgccgggctatgtcggttacggccggggtggcgtgctgacc
gaggcggtgcgccgccgcccgtacagcgtggtgctgctcgacgagatggagaaggcgcat
cccgacgtgctggagctgttcttccaggtcttcgacaagggcgtgatggaagacggcgaa
ggcgtgccgatcgatttccgcaacacggtgatcctgctgacctcgaacgcggcgcaggac
gtgatcaccgaggcctcgcgcggcggccggcgcccgccgccgcaggaactggtcgagaag
ctgcgcccggcgctgctcaggcagttcagcccggcgttcctggcgcgcctggtgctggtg
ccgtactaccacctgggcgatgcgcagatccgcaatatcgtcgacctcaagctggcgcgg
ctggcgcagcgctttgcgcgcaaccacaacgcgcgcctgagctgggacgaggcgctggcg
caggcgatcacgcagcgctgcaccgaggtcgacagcggcgcgcgcaatgtcgaccatatc
ctgacccagtcggtgctgccggaactggcgcggcgcgtgctggagcagctgtcgatctcg
gagccgttcggcggcgtgcatctctcgctcgacaccggcggcggggtggcgttccgcttc
ctgccgcaagcggggtgctga

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