Cupriavidus necator H16: H16_B2551
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Entry
H16_B2551 CDS
T00416
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II, adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
reh
Cupriavidus necator H16
Pathway
reh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H16_B2551 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
reh03000
]
H16_B2551 (alkA)
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_B2551 (alkA)
Enzymes [BR:
reh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
H16_B2551 (alkA)
Transcription factors [BR:
reh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
H16_B2551 (alkA)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H16_B2551 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAJ97333
UniProt:
Q0JY41
LinkDB
All DBs
Position
2:complement(2877265..2878746)
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AA seq
493 aa
AA seq
DB search
MHLDPDTCYKAVASHDRRFDGRFFVGVSSTGVYCRPVCAVRTPKRENCTFYESAAAAEKH
GFRPCLRCRPELAPGHGLADISGRLAQAAATLIDEGFMAEGSVATLAARIGVTERHLRRL
FDAQFGVSVLEYAQTQRLLLAKRLLADTALPVTEVALAAGFGSVRRFNDVLKTRYGLTPL
ALRRRAADGVADRLVFDLGYRPPFAWEAWLRFLATRAVDGIEAIRDGTYMRTLLVDAGGS
THTGWVRIEHVPRRLVLRVTLSASLARVIPQALGKVRRLCDLGCRPDVVDRHLGELAEAM
PGVRLPGSVDGFEIAVRAVVGQVISVVQARRILGALARHAGQALDGTPPDGLRYTFPSAA
AIATLPEQGLRDAGVSAGKARTLLALAQRVANGTLALDAHAQPELTVAALREVDGIGDWT
AQYVAMRALGWPDAFPGTDYALRKVLGVSTVRAMHERTAQWAPWRAYAAIHLWHRYEAMK
DAASAAAEPETIT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgatcccgacacctgctacaaggccgtcgcctcgcacgaccgccgcttcgac
ggacgcttcttcgtgggcgtgtcgtcgaccggcgtgtactgccggcccgtgtgcgcagta
cgcacgcccaagcgcgaaaactgcaccttctacgagagcgccgcggcggcggagaagcat
ggcttccgcccctgcctgcgctgccgtccggagcttgcgcccgggcatgggctggccgat
atttcaggccggctggcgcaggcagcggccacgctgatcgacgagggcttcatggccgaa
ggcagcgtggccacgctggcggcgcgcatcggcgtgaccgagcggcacctgcggcgcctg
ttcgatgcgcagttcggcgtgtcggtgcttgagtacgcgcagacgcagcggctgctgctg
gccaagcgcttgctggccgacaccgcgctgccggtgaccgaagtggcgctggcggcgggt
ttcggcagcgtgcgccgcttcaacgatgtgctgaagacccgctacggcctgacgccgctg
gcgctgcgccgccgcgccgccgacggcgtggccgaccggctggtgttcgacctgggttac
cgcccgccgtttgcctgggaggcatggctgcgtttcctggctacccgcgcggtggatggc
atcgaggcgatccgggacggcacctatatgcgcacgctgctggtggatgccggcggcagc
acgcacaccggctgggtacggatcgaacacgtgccgcgccggctggtgctgcgcgtgacg
ttgtcggcctcgctggcgcgcgtcattccgcaggcgctgggcaaggtgcgccgcctgtgc
gacctgggctgccgcccggacgtggtggaccggcacctgggcgagcttgccgaggccatg
ccgggcgtgcgcctgccgggcagcgtcgatggcttcgagatcgcggtgcgcgcggtggtg
gggcaggtgatctcggtggtgcaggcgcggcgcatcctgggcgcgctggcgcggcacgcg
ggacaggcgctggacggcacgcccccggacggcctgcgctacacgttcccgagtgccgcc
gccattgccacactgccagagcaaggcttgcgcgatgccggggtgtcggcgggcaaggcg
cgcacgctgctggcgctggcgcagcgcgtggccaacggcacgctggccctcgatgcgcac
gcgcagccggaactgaccgtggcggcgctgcgcgaggtcgacggcatcggcgactggacc
gcgcagtatgtcgccatgcgcgcgctgggctggcccgatgcgttccccggcaccgactat
gcgctgcgcaaggtgctgggcgtcagtaccgtgcgcgcgatgcacgagcgcaccgcgcaa
tgggcaccgtggcgtgcctacgccgccatccacctgtggcatcgctacgaagcgatgaag
gacgcggccagcgccgcggccgaaccggagacgatcacatga
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