Cupriavidus necator H16: PHG399
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Entry
PHG399 CDS
T00416
Symbol
fadD1
Name
(GenBank) putative long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
reh
Cupriavidus necator H16
Pathway
reh00061
Fatty acid biosynthesis
reh00071
Fatty acid degradation
reh01100
Metabolic pathways
reh01212
Fatty acid metabolism
reh02024
Quorum sensing
reh04146
Peroxisome
Module
reh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PHG399 (fadD1)
00071 Fatty acid degradation
PHG399 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PHG399 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PHG399 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
reh01004
]
PHG399 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
reh04147
]
PHG399 (fadD1)
Enzymes [BR:
reh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PHG399 (fadD1)
Lipid biosynthesis proteins [BR:
reh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PHG399 (fadD1)
Exosome [BR:
reh04147
]
Exosomal proteins
Exosomal proteins of breast milk
PHG399 (fadD1)
Exosomal proteins of breast cancer cells
PHG399 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAP86148
UniProt:
Q7WWU3
LinkDB
All DBs
Position
pHG1:complement(417947..419482)
Genome browser
AA seq
511 aa
AA seq
DB search
MVASLQYGEARFDGAEIERRAAQVAGGLAALGVGEDDVVAIVLRNAPALFEITLACNRVG
AYHCPVDWRFTVDELGYILQDSGACVLFIEADLLATLRAAIPEGVRVLAVTPEPLALQAY
PTSRVTGEVPADVLRYEAWRSAQAAYSGPSHRPRGRFAYTSGTTGRPKGVRRLAQGLHPE
QPRLLRDTVKAVFDFSADARVYLSAPLYHGAPNLYGMQAMLATGLVVLDPRFDAEATLRA
IERHRITHLYLVPTMCVRLLALPQHVRNRYDLSSVRFVACTGAPFAVAIKQAMINWWGPV
INESYACSEMGMITVISSADAIRKPGSVGRPVSEAEVRIYSDAGCRLGTGGVGNIHVRQP
AYADFTYHNRPEARAAMDCEGLACVGDMGYVDADGFLFICDRKADMVISGGVNIYPAEIE
DALSGMPGVADCAAFGVPHEEFGEMVVAVVQPSDGTGLDPEEMRAWLKDRLAAYKVPKVI
ELRTELPRQESGKIHKRKLRDGYWQHAGRRI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtagcctcactgcaatatggcgaagcccggttcgacggcgctgagatcgaacgccgc
gccgcgcaggttgccggcggcctggctgccctgggcgtgggagaggacgatgtcgtggcc
atcgtgcttcgcaacgcgcccgcgctgttcgagatcacgctggcatgcaaccgcgtcggc
gcgtatcactgtccggtggactggcggttcaccgtggatgagctgggctatatcctgcag
gacagcggtgcctgtgtcctgttcatcgaggcggacctgttagcaacattgcgtgccgcg
atcccggaaggggtgcgcgtactggcggtcacgccagaaccgttggccttgcaggcttat
cccacttcgcgcgttaccggcgaagtgccggcagacgtccttcgctatgaagcatggcgc
agcgcacaggcggcgtacagcggtccgtcgcaccggccgcgcggacgcttcgcctatacc
tccggcactactggacgtccaaaaggcgtgcggcgcctcgcgcagggcctgcatccagag
cagccgcgcctgctgcgcgataccgtcaaggccgtgttcgatttttccgcggatgcgcgc
gtgtacctgtccgcgccgctgtatcacggcgcccccaatctctacggtatgcaggccatg
ctggcgaccgggctggtcgtgctggatccccgcttcgatgccgaagccacgctgcgcgcc
atcgagcgccatcgcatcacgcacctgtacctggtgcccaccatgtgcgtacgcctgctg
gcgttgccgcaacacgtacgcaaccgctacgacctgtcgtccgtgcgcttcgtcgcctgt
acaggcgcgccctttgccgttgccatcaagcaggccatgatcaattggtgggggccagtg
atcaacgaatcgtatgcgtgcagcgaaatgggcatgatcaccgtgatttcgtccgcggac
gccatccgcaagcccgggtcggtcggccggcctgtgagcgaggccgaggtgcgcatctac
agcgacgcgggctgccgcctcggcacaggaggggttggcaacatccatgtgcgccagcct
gcttatgcggactttacctaccacaatcgccctgaggcgcgcgccgcgatggattgcgaa
ggactggcgtgcgtaggcgacatgggctacgtggatgccgacggcttcctgttcatctgc
gaccgcaaggccgatatggtgatctccggcggtgtgaacatctacccggccgaaatcgaa
gacgcgctgtccggcatgccgggcgtggcggactgcgcggcgtttggcgtgccccacgaa
gagtttggcgaaatggtcgtggcagtagtacagccctctgacggcacgggattggatccg
gaggaaatgcgtgcgtggctgaaagaccggctcgccgcttacaaggtgccgaaggtgatc
gaactgcgcaccgaactgccgcgccaggaaagcggaaagatacacaagcgcaagctgcgc
gatggctactggcagcatgccgggcgcaggatctga
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