Rhizobium etli bv. mimosae IE4771: IE4771_CH00026
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Entry
IE4771_CH00026 CDS
T03310
Name
(GenBank) double-strand break repair helicase AddA type protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_CH00026
Enzymes [BR:
rei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IE4771_CH00026
DNA repair and recombination proteins [BR:
rei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IE4771_CH00026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
AAA_30
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIC25209
UniProt:
A0A060HUQ7
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All DBs
Position
complement(21387..24935)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSERSDLPDNDDPGAWIGWTTIQQAIASDPVRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDDDLSRRIIEIEGTAPDRIKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGGALAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFTAAAEQQGGVDMVLRKRLG
LAADDTERGIAAQYWPLPELSGGTLQLYLSLADQKGGAKAQEVAYGLRLADREPDDARRA
AMLEKIFLTAKGEPKTDAQFLVKAMLAEAPKLAEAIATARAHVAASRDRLKLMRMHDATQ
AALVLADRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDEIFRTSDNARGLSAVGEPVVHRSSRIGHP
GAVDLWEMVAPEAVVKEEDWTAPFDATPESAPAAILARRIAHSIGALVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLTLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEEDIFAVAALRGDNESVWSHLKKFADGNERFRMAVEKLELFL
RQSKTLSVHDFYARLLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFVS
TLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIETD
PDEPPMPAWVPVADLSNSLTQNDAARIQILAEEEYRRLLYVAMTRAADRLVVCGYRGVRA
NNDTWHMMISTALSEGHPHVEAASFSDPDGEWQGIRWRVPRVERSFERIIRSEARDDEIS
LPEGLLRPLPPQAELPRPLSPSGAGTIIDEDEGGLVVASPLFSEKQRSDRSLEKGRLLHR
MLQALPDIPPEERPGAAQRYGERAARFWPEAERRKLVDSVLKLLDEKDLQPILGEQARPE
VSIMGTLTLDGRRYAVSGRIDRLAVLTDRVVILDYKTNRVPPASEDAIPFAHRAQLAIYR
EILAPLYPGKRIDCMLVYTENASLYTLSEKALGLALAGLKTK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcggagcgaccttcctgataatgacgatccgggggcctggatcggctggacc
acgatccaacaggcgatcgcctccgatccggtgcgctcggcatgggtttcggccaatgcc
ggttccggcaagacgcatgtcctgacccagcgcgtcatccggcttctgctcgccggcgcg
cggccttcggccattctctgcctcacctataccaaggccgcggcttcggaaatgtcgaac
cgcgtcttcgaacggctggccgactgggtcgtgcttgacgatgacgatctcagccggcgg
atcattgagatcgaaggtacggcgcccgatcggataaaactggccgaggcccggcggttg
tttgccaaggcgctggagacaccgggcggcttgaagatccagacgatccacgccttttgc
gaggcgctgctgcatcagttcccactggaggccaatgtcgctgggcatttttcggttctc
gacgaccgcgccgccgcggcgctgctttccgatgcgcgccgggcgctgctgacggcgact
gcacctgaagaaggcggcgcccttgcagaggctttcgcctacgttctcaatctcggcgac
gaatccggcctggagaacctgctcggcgacattgtcgccaaccgcaacgccatccgccgc
tttaccgcggccgccgaacagcagggcggcgtggacatggttctgcgcaaaaggttgggg
ctcgccgccgatgacaccgagagaggcatcgcggcgcagtactggccgctgccggaactt
tcaggcggtacgctgcaactttatctgtcgctggccgatcaaaagggcggcgccaaagcg
caggaggttgcctatggcctcaggctcgccgaccgggagccggatgacgccagacgcgct
gcgatgctcgagaaaattttcctgacggccaagggcgagccgaaaacggacgcgcagttc
ctggtcaaggccatgcttgccgaggcgccgaaattggcggaggccattgccaccgcccgc
gctcatgtcgcggcaagccgcgaccggctgaaactgatgcggatgcacgacgccacgcag
gccgcgctcgtgctcgccgaccggctgaatcacgattacgaggaactgaagaaacagcgc
agccaactcgatttcgaggacctgatcacccgcaccgccgacctgctgacaaagagcggc
gtcggtccctggatccattacaagctcgaccggggtatcgatcatatcctcgtcgacgag
gcgcaggataccagcccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagcgcccggccgatcgtgcgcacgctgtttgccgtcggcgacgagaaacag
tcgatctattcctttcagggggcgcggcccgagcgtttttcggaagagagcgaccggacg
cggcggcgcgtctcggacagcgggcagagcttttcttccgtgcggctgccgctctccttc
cgctcgactgccgacgtgctcgaggccgtcgacgagattttcaggacatccgacaatgcg
cgaggcctcagcgctgtcggcgagccggtcgtgcatcgttccagccgcatcggacatccc
ggcgccgtcgacctctgggaaatggtcgcgccggaagcggtggtgaaggaagaggattgg
acggcgcccttcgatgcgacgcccgaaagcgcgccggccgcaattctcgcgcggcggatc
gctcattcgatcggcgcgctcgtcggccgtgaaacgatcgtcgacaagggcaaggagcga
ctgatcgaggccggtgatattcttgtgctggtgcgcaagcgcgacgccttcgtcaatgcc
ttgacccgcgccttgaagcgtcgcggcgacattccggtcgccggcgccgacaggctcacc
ctgaccagccatatcgccgtgcaggatctgctcgcactcggccgcttcctgcttctgccg
gaagatgacctttcgctcgccgccgtgctcaagagcccgcttttcgatctgtccgaggag
gacatctttgcggtcgcggcgctgcggggcgacaatgagagcgtttggagccatctcaag
aaattcgccgacggcaacgagcgtttccgcatggcggtcgaaaagctggaactgttcctc
cgacaatcgaaaaccctatcggtgcatgatttctatgcgcgcctgctgggcagtcacggc
ggacggcggcagtttcttgcccgcctcggcaccgaagtcagcgatatcctcgacgaattc
ctgaccttcaccctcgaccatgagagctccggccttcccgggctgcaatccttcgtctcg
acgctcgagctcgaagcgcccgaggtgaagcgcgagcaggacaagggacgcaacgaggtc
aggatcatgaccgtgcatgcctcaaagggtcttgaggcacccatcgttttcctggtcgac
ggtggctccaaagccttcacgcatacgcatctgcccaagcttcgcctgatcgaaaccgac
ccggatgagccgccgatgcccgcctgggttcccgtcgccgacctctccaattcgctgacg
cagaacgatgccgcgcgaatccagatactggccgaagaggagtatcgccggctgctctat
gtcgccatgacgcgggccgccgaccggctggtcgtctgcggctatcgtggcgtgcgcgcg
aacaacgacacctggcatatgatgatttccaccgcgctcagcgaaggtcatccgcatgtg
gaggcagccagcttctccgaccccgacggggaatggcagggcatcagatggcgcgtgccg
cgggtggagcggagcttcgagcgtatcatccgcagtgaggcgcgcgacgacgaaattagc
ctgccggaaggcctgttgcggccattgccgccacaggcggaactgcctcggcccctcagc
ccttccggcgccgggacgatcatcgacgaagacgaaggcggcctggttgtcgcttctccg
ctgttttcagagaagcaacgcagcgatcgctcgctggagaaaggcaggctgctgcatcgc
atgctgcaggcgcttcccgatattccgccggaggagcggcccggtgcggcacagcgttac
ggcgaacgggcggcccgtttctggccggaggccgaacggcgcaagctggtcgattcggtt
ctgaaactattggacgagaaggacttgcagcccatcctcggcgagcaggcccggcccgag
gtctcgatcatggggacattgaccctcgacggcagacgctatgccgtctccggccgcatc
gataggctggcggtgcttaccgatcgtgtcgtcattctcgattacaaaaccaatcgcgtg
ccgccggcgtccgaagacgccatcccctttgcacaccgggcgcagctggcgatctatcgc
gagatcctggcaccgctctatcccggcaagcgcatcgactgcatgctcgtctataccgag
aacgcctcgctctacacgctgagcgaaaaggcgctcggtttggcgcttgcaggactgaag
acaaagtga
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