Rhizobium etli bv. mimosae IE4771: IE4771_CH00027
Help
Entry
IE4771_CH00027 CDS
T03310
Name
(GenBank) double-strand break repair helicase AddB type protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_CH00027
Enzymes [BR:
rei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IE4771_CH00027
DNA repair and recombination proteins [BR:
rei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IE4771_CH00027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AIC25210
UniProt:
A0A060HZZ8
LinkDB
All DBs
Position
complement(24928..28122)
Genome browser
AA seq
1064 aa
AA seq
DB search
MTERHQPRILTIPAGLPFLKTLATTLCDGRLTPLFRHDADDPLSLAGVTIYLPTRRAVRV
LRSAFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPARLSELGKSSPARHRNAILRAEAARLSATKPGGPIIIAGST
GSVPATADLIAAVADLPEGVIVLPGLDLTMPEGHWQMVAPEPAPGQHANPASRSHPQYGL
SSLLKRLRLTRADVSILDRPEADLDRRAEILSRALAPAEATSDWGTWKSELPGGALTSAF
NDVSLIEAANEREEATAIAVALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSATPQGSLLQLLLEAALRPGDPVAIVSLLKHPLARFGLERDALISATEALE
LLALRGGVVEVDISALEPLLTHQLAEQALDRHAPQWRKALPAEAADAAFELARRVGQATE
PLAAALVRHQPEDRGKTASFTLSEWAARTGRALEAVAADPQGNLADLWSNEAGDALASLL
GEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGSWPGQSANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEAELKGRGSRFLQWAGLIDRGESQAPAQRPSPKPPLPLQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDAFNRDPGAAERGTLYHTIIDRFIRAAHVAGT
PEAAAAMELILTELFDMEKLPPHIDAVWRPRFREVARAFLEWEAGRRPAIRRTLTEVRGG
VELEAINIRLNGVADRIDITGPNAADIIDYKTGYNPSPAQARALLDPQLALEAAALRAGA
FRDAGGLTPQDLLYVRLRPGNRFQVDMVNNENAARSDKAKSAIDLAEESVDQLIKFVSLL
QSGEKGFTSRLIPAQQFDFGGDYDHLARVSEWSTAENEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcggcaccagccacgcatcctgacgatcccggcgggccttcccttcctgaaa
accctggcgacgacactgtgcgacggccgattgacgccgctcttccgacatgatgccgac
gacccgctgtcgctcgccggagtaaccatctacctgccgacgcggcgcgccgtacgtgtg
ctgcgctcggcattcgtcgatctgcttggcggccggtcggcgatcctgccggtcatccgc
cccctaggtgaaaccgatgatgacagcggctatttcgacgaggcgctgccagcgacgatc
gacctcgcccagccgctgtcgaatactgcgcggctgctggaactggcgcgcctgatcctt
gcctggcgcaacaaactgccggagatcgtccgccatattcattcggactcgccgctcgtt
gcgccggcaagcccggcggatgcgatctggctcgcccgcaatctcgccgagctgatcgat
tccatcgaaaccgaggatctcgactggtcggaactgtcgaagctcgacaccggcgactat
gccgcctggtggcaactgacggcggagtttctgcagatcgccagcgccttctggccggcg
cggctttccgaactcggcaaatcttcgccggcgcggcacagaaacgccattctcagggcc
gaagcggcccggctttcggcgacgaagcccggcgggccgatcatcatcgccggctcgacg
ggttcggttccggcgactgccgatctgattgccgccgtcgccgatctgcccgaaggcgtg
atcgtccttccgggcctcgatctcaccatgccggaagggcattggcagatggtcgcgccg
gaaccggcgccgggccagcatgccaacccggccagccggagccatccgcaatacggactg
tcgtcgctgctgaagaggctgaggctgacacgggccgatgtcagcatccttgacagaccg
gaggccgatcttgaccgacgcgccgaaatcctgtcccgggcgctcgccccggcagaggcg
accagcgactggggaacatggaagagcgagctccccgggggagcgctgacttcggccttc
aacgacgtttcgctgatcgaagccgccaacgagcgtgaggaagcaaccgcgattgccgtc
gcgctcagactggcgctggaacggccggggcaggacggtgagagccgggcagccctgatc
acgccggaccgcaacctcgcccgtcgggtgatggcggagctttcccgcttcggcatcctc
gccgacgattcggccggcacgccgctttcggccacgccgcagggcagcttgctgcaattg
ctgctagaggcggcgctgcgcccaggtgatccggtggcgatcgtctcgctgctcaaacat
ccgctggcccgcttcggcctcgaacgcgacgccctgatttccgccaccgaagcgctcgaa
ctgttggcgctgcgcggcggcgtggtggaagtggatatcagcgcgctggagccgctgctc
acccatcagctcgccgaacaggccctggacaggcacgcgccgcaatggcgaaaggcgctt
cccgctgaggccgccgatgccgcattcgagcttgcccgccgggttggccaggcgacggag
ccgcttgccgccgcgctggtccggcaccagccggaggatcgtggcaagacggcgagcttc
acgctctccgaatgggccgcgcgcaccggccgtgctctcgaagcggtcgcggccgatccg
caaggcaatcttgccgatctctggtcgaacgaggcgggggacgcacttgcctcccttctc
ggcgaggtgatcgacacagacgggcagatggaggccgacgggccgcaatggattgacatc
atggcggcgcttgccgccggccatgcggtgaagccacgggcgctgagccatcccaggctg
ttcatcttcggcacgctggaagcccggctgcagagcgtcgatacgctgatcctcgggggg
ctgaacgaaggctcatggccggggcagagcgccaacaatcccttcattccgcgaatgatg
aagacggagatcgggctcgaaccgccagagcggcgcatcggccagctagcgcatgatttc
gagatggcgaacggcacccgccacctgatctattccagggcgctgcgtcagggctcgacg
ccgacggtcgcctcgcgctggctgcagcggctgctggcgctgggcggggaggcgttcgaa
gcggaactcaaggggcgcggcagccggttcttgcaatgggccggtctcatcgatcgggga
gagagccaggcgccggcgcaacggccttcaccgaaaccgccgctgccgctgcagccgaaa
tcctactccttcagcgaggtcggacggctgcgccgcgatccctatgccatctatgcccgc
cgcatcctgcggctggatccggtcgacgcgttcaatcgcgaccccggcgcagctgaacgc
ggtacgctctatcacacgatcatcgaccggttcatccgcgcagcgcatgtggccggcacg
ccggaggcggcagcagcgatggagcttatcctgaccgagcttttcgacatggaaaagctg
ccgccacatatcgatgccgtatggcggccgcgctttcgggaagtggctcgcgccttcctc
gaatgggaggccggacgacggccagccatccgccggacgctgacggaagtgcgcggcggc
gtggagctggaggcgatcaatatccggctcaatggcgtcgcggaccggatcgacattacc
gggccgaacgccgccgacatcatcgactacaagaccggctacaacccctcgccggcgcag
gcacgcgcgcttctcgatccgcagctcgcgctggaagcggcggccttgcgcgccggcgcc
tttcgcgatgccggcggcctcacgccgcaggatctgctctatgtccggctgcgtcccgga
aaccggttccaggtcgatatggtcaacaatgaaaacgccgcccgcagcgacaaggcgaaa
tcggcaatcgaccttgccgaggaatcggtcgaccagctgatcaagttcgtcagcctgctg
caatccggcgaaaaaggctttacctcgcggctcatcccggcgcagcaatttgatttcggc
ggcgactacgatcatctcgcccgcgtctccgaatggtcgacggccgagaatgaggaaggc
ggcggcgatgagtga
DBGET
integrated database retrieval system
