Rhizobium etli bv. mimosae IE4771: IE4771_CH00109
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Entry
IE4771_CH00109 CDS
T03310
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rei03016
]
IE4771_CH00109
Enzymes [BR:
rei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IE4771_CH00109
Transfer RNA biogenesis [BR:
rei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IE4771_CH00109
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIC25284
UniProt:
A0A060HUW8
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All DBs
Position
118035..118661
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AA seq
208 aa
AA seq
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MAATIRYHEGDISAADAARYTGAVAIDTETLGLVPRRDRLCVVQLSPGDGTADVIRIAAG
QKEAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLIRTYTDRHGL
KDNLKEMLDIDISKTQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTARLIRDGRFDH
ATACFEFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatacgttatcacgaaggcgatatatcagcggccgatgccgcccgctac
accggcgcggtagcgatcgacaccgaaacgctcggcctggtgccgcgccgcgatcggctc
tgcgtcgtccagctttcgccgggtgacggcaccgccgacgtcatccgtatcgctgccggc
cagaaagaggcgcccaacctggtcgccctgctcgaagatcccactcatcagaagatcttt
cactatggccgcttcgatattgccgtgctcttccacactttcggcgtcaccacgaccccg
gtcttctgcactaagatcgcctcgcgcctgatccggacctacaccgatcgccatggcttg
aaggacaatctcaaggagatgctcgacatcgatatctccaagacgcagcaatcttccgac
tgggcggccgaaactctgtctccggcccagctcgaatatgccgcttccgacgtgctttac
ctgcatgctttgcgcgacaagctgaccgcacgcctgatccgcgacggccgcttcgaccat
gccaccgcctgcttcgaattcctgccaacccgcgccaagctcgacctgctcggctgggaa
gaggccgatatcttcgcccatagctga
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