Rhizobium etli bv. mimosae IE4771: IE4771_CH00126
Help
Entry
IE4771_CH00126 CDS
T03310
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE4771_CH00126 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rei03019
]
IE4771_CH00126 (pnp)
03016 Transfer RNA biogenesis [BR:
rei03016
]
IE4771_CH00126 (pnp)
Enzymes [BR:
rei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IE4771_CH00126 (pnp)
Messenger RNA biogenesis [BR:
rei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IE4771_CH00126 (pnp)
Transfer RNA biogenesis [BR:
rei03016
]
Prokaryotic type
tRNA degradation factors
IE4771_CH00126 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AIC25300
UniProt:
A0A060I071
LinkDB
All DBs
Position
complement(132467..134605)
Genome browser
AA seq
712 aa
AA seq
DB search
MFDTHTVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVA
GTYDAVLMVESEAKELPEDVMLGAVMFGHRGFQPVLDAIIKLAEVAAKEPRDFQPEDYSA
LESEMLGLAEAELREAYKITQKADRYAAVDAVKAKVKAHFLPEEGEAKYTAEEVGAIFKH
LQAKIVRWNILDTKSRIDGRDLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALGQAQGGRKHILGEMAK
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEIGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTQDVVKEGDKVWVKLLGFDERGKVRLSMKVVDQATGQEIANEKKKEEAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacacacaccgtggaaatcgagtgggccggccgcccgctgaagcttgaaacc
ggcaagatcgcccgtcaggccgatggcgcggttctcgccacctacggcgagaccgtcgtt
ctcgccaccgtcgtttcggccaaggcgccgaagcccggccaggacttctttccgctgacc
gtcaactaccaggaaaagacttacgcagccggcaagatccctggcggctatttcaagcgc
gaaggacgcccgagcgaaaacgagaccctcgtttcccgcctgatcgaccgcccgatccgc
ccgctcttcccggaaggctacaagaacgacacccaggtcgtcgtcaccgtcatccagcac
gaccttgaaaacaaccccgacatcctgtcgatggtcgcgacctcggcagcgctgacgctc
tccggcgttcccttcatgggcccggtcggcggtgcgcgcgtcggctacatcaatggcgaa
tatgttcttaacccgcatctcgacgagatggacgagtcgagcctcgacctcgtcgtcgcc
ggcacctacgacgccgtgctgatggtcgaatccgaagccaaggaactgcccgaggacgtc
atgctcggcgccgtcatgttcggccacaggggtttccaaccggttctcgatgcgatcatc
aagctcgccgaagttgccgccaaggagccgcgcgacttccagccggaggactattccgcg
ctcgaaagcgaaatgctcggcctggcggaagccgaattgcgtgaagcctacaagatcacc
cagaaggccgaccgctacgccgccgtcgacgccgtcaaggcaaaggtgaaggcgcatttc
ctccccgaggaaggcgaagccaagtacacggccgaggaagtcggcgcgatcttcaagcac
ctgcaggccaagatcgtccgctggaacatcctcgataccaagagccgtatcgacggccgc
gacctcgaaaccgttcgtccgatcgtttcggaagtcggtcttctgccgcgcacccacggt
tcggcgctgttcacccgcggcgaaacccaggcgatcgtcgttgccacgctcggcaccggc
gaagacgaacagtatgtcgacagcctgacgggcatgtacaaggagcgcttcctgctccat
tacaacttcccgccttactccgtcggcgaaaccggccgcatgggctccccgggccgccgc
gaaatcggccacggcaagcttgcatggcgcgccatccgtccgatgctgccgtcggccgaa
caattcccctacacgctgcgcgtcgtctccgagatcaccgaatcgaacggctcgtcctcg
atggcaaccgtctgcggcacctcgctcgccctgatggatgccggcgttccgcttgccaag
ccggttgccggtatcgccatgggcctgatcctcgaaggcgaccgcttcgccgttctctcc
gatatcctcggtgacgaagaccacctcggcgatatggacttcaaggttgcaggtacggca
gacggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgctctcggccaggcccagggcggccgcaaacacatcctcggcgaaatggccaag
gccattaccgaaagccgcggccagcttggcgaattcgcgccgcgcatcgaagtcatgaac
attccggtcgacaagatccgcgaagtcatcggctccggcggcaaggtcatccgcgaaatc
gtcgaaaagaccggtgcgaagatcaacatcgaggacgacggcaccgtcaagatcgcctcc
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgttgccgagcct
gaaatcggccagatctacgaaggcacggttgtcaagaccgccgacttcggcgccttcgtc
aacttcttcggcgcccgcgacggcctcgtccatatctcgcagctcgcttccgagcgcgtt
gccaagacgcaggacgtcgtcaaggaaggcgacaaggtctgggtcaagctgctcggcttc
gacgaacgcggcaaggttcgcctgtcgatgaaggtcgtcgaccaggccaccggccaggag
atcgcgaacgagaagaagaaggaagaagcggccgaataa
DBGET
integrated database retrieval system
