KEGG   Rhizobium etli bv. mimosae IE4771: IE4771_CH00616
Entry
IE4771_CH00616    CDS       T03310                                 
Name
(GenBank) DEAD/DEAH box type DNA/RNA helicase protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rei  Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:rei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rei03400]
    IE4771_CH00616
Enzymes [BR:rei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IE4771_CH00616
    5.6.2.6  RNA 3'-5' helicase
     IE4771_CH00616
DNA repair and recombination proteins [BR:rei03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IE4771_CH00616
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: AIC25774
UniProt: A0A060HW91
LinkDB
Position
598149..600659
AA seq 836 aa
MDQIDSEARALLPAAFTRWFAEKGWRPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGKIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVAEMGLPVTVENRTGDT
PNAKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYVVLDELHSLVTSKRGHMLS
LGLARLRRLAPGLKTIGLSATVAEPMDLQKWLVAQEEGREHHAGLVVVEGGAKPDISILS
TEERIPWAGHSAKYAIPDVYRQLLDHQTTLLFVNTRSQAEMLFQELWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEITSASPYADLSWENFERVVDFVATGGYALRTYERYARIRKTKEGRWRVSNP
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFVFSG
KVLRFEGIRENECLASQAFSLDPKIPSYNGGKFPLSTYLAEQVRAMIADPDRWRHLPDQV
RDWLSLQTDKSMLPKRDEFLIETFPRGSRGYMVAYPFEGRLAHQTLGMLLTRRLDRAGAK
PLGFVATDYSLAVWALEDMGLMIGNGRLSLSDLFDADMLGDDLEAWLNESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDIGRLG
DMLMRIRGHITHRPLDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgaagcccgagccctgcttcctgccgcctttacccgctggttt
gcggaaaagggctggcgtccgcgtgcccatcagctggaattgcttgcccgcgccgaggcc
ggcgaaagcacgctgctgattgcgccgaccggcgccggcaagacgcttgccggttttctg
ccgtcgctcaccgatctcacccgccgcggcaagattccgccgggctccgccttcaccggc
atccatacgctttatgtctcgccgctgaaggcgctggcgatcgatatcgagcgtaatctg
atgaagccggtcgcggagatgggcctgccggtcaccgtcgaaaaccgcaccggcgatacg
ccgaacgccaagcgccagcgccaaaaactcaacccgccggatattctgctgacgacgccc
gagcaggtcgccctgcttctcgccaaccgcgaggccgagcgcttcttcaaggatctgaaa
tatgtggtgctcgacgaattgcattcgctcgttacctccaagcgcggccatatgctgtcg
ctcggccttgcccgcctgcgccgccttgccccaggcctcaagaccatcggcctgtcggcg
accgtcgccgagccgatggatctgcagaaatggctggtcgctcaggaggagggcagggag
catcacgccggcctcgtcgtcgtcgaaggcggcgccaagcccgacatttcgatcttgtcg
accgaggagcgcattccctgggccggccattccgccaaatatgccattcccgatgtctac
aggcagctcctcgaccaccagacgacgctgctgttcgtcaatacccgcagccaggccgaa
atgctcttccaggagctttggacgatcaatgacgacaacctgccgatcgcccttcaccat
ggctcgctcgatgtcgcccagcgccgcaaggtcgaggcggcgatggccgaaaaccggctg
cgtgccgtcgtcgccacctcgacgctcgatctcggcattgactggggcgatgtcgatctg
gtcatccatgtcggcgcgccgaagggcgcctcgcgccttgcccagcgcatcggccgcgcc
aatcaccgcatggacgagccgtcgaaggcgatcctcgtgccggccaaccgtttcgaggtg
atggagtgccaggcggcactcgacgccaattatatcggcgcccaggatacgccgccggtc
ggccgcggtgcgctcgacgtgctcgcccagcacgtgctcggcatggcctgcgccgaaccc
ttcgacatgctggaactctatgacgagatcaccagcgcctcgccctatgccgatctcagc
tgggaaaacttcgaacgcgtcgtcgatttcgtcgcgaccggcggttatgcactgagaacc
tatgagcgttacgcccgcatccgcaagaccaaggagggccgctggcgcgtctccaaccct
gctgtcgcccagcaatatcgcctcaacctcggcaccatcgtcgaaagcccgatgctgaac
atccgcatggtcaagcgcggcgagggcggccggatcggccgcggcggcgccacgctcggc
aaggtcgaggaatatttcctcgagcaattgtcgcccggcgataccttcgtcttctccggc
aaggtgctgcgcttcgagggcatccgcgaaaacgaatgcctggcgtcgcaggccttttcg
ctcgatccgaagatcccgtcttacaatggcggcaagtttccgctgtcgacctatcttgcc
gagcaggtgcgggcgatgatcgccgaccccgaccgctggcgccatctgcccgatcaggtg
cgcgactggctgtcgctgcagacggacaaatcgatgctgccgaagcgcgacgagttcctg
atcgaaaccttcccgcgcggcagccgcggctacatggtcgcctatcccttcgagggccgc
ctcgcgcaccagacgctcggcatgctgctgacgcgccggctggaccgggcgggcgccaag
ccgctcggcttcgtcgccaccgattattcgctcgccgtctgggcgctggaggatatgggc
ctgatgatcggcaacggccggctcagcctttccgacctgttcgacgcggacatgctgggt
gacgatctcgaagcctggctcaacgaatccttcctgctgaagcgcaccttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatcctggcaaggaaaagagcggccgccag
atcaccgtctccgccgatctgatctatgacgtgctgcgcagccacgagccggatcacatc
ctcctgcaggcgacgcggcaggatgcggcgaccggacttttggatataggccgacttggc
gatatgctgatgcgaatcaggggccatatcacccaccgcccgctcgatcatatttccccg
ctcgccgtgccggtgatgctggagatcggacgcgaagcggtgccgggcgaggcccatgac
gcattgctcgctgaagcggcggacgatctgatcgccgaagcgctggcgtaa

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