Rhizobium etli bv. mimosae IE4771: IE4771_CH01098
Help
Entry
IE4771_CH01098 CDS
T03310
Name
(GenBank) VCBS repeat-containing/serralysin-like metalloprotease domain-containing protein
KO
K20276
large repetitive protein
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IE4771_CH01098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Big_9
Cadherin_4
CshA_repeat
HemolysinCabind
Peptidase_M10_C
Motif
Other DBs
NCBI-ProteinID:
AIC26249
UniProt:
A0A060HXM4
LinkDB
All DBs
Position
complement(1112181..1116215)
Genome browser
AA seq
1344 aa
AA seq
DB search
MATTTVSGTTVTFSNSGAAANVTQSGTEDGSLQFTFDVLTASGGGVKTTIYSVDDGVKND
DGGAAIIVTNKAFVDYNKDLLMQDGVGISFSQTSQMGATFWIGSDNKIHYDAAGLSAQIN
ALDAGETFTDTIQYTIKMSNGTLSVGTLTVVINGINDAPVLSGNPATLAAGAEDTAYTFS
TADLLAGFTDVDGDQLSVAGLTADHGALIDNNDGSWTFTPDANYNGPVSLSYSVIDGNGG
SVPASQSFTLDAVNDAPVLSGNAATLVAGTEDTPYTFSSADLLAGFTDVDGDQLSVSGLT
ADHGALIDNNDGTWTFTPDANYNGPVSLSYSVIDGNGGSVPATQSFTLDAVNDAPVLSGN
PATLSAGSEDTPYTFNTADLLAGFTDVDGDQLSVSGLTANHGALIDNNDGTWTFTPDANY
NGPVSLSYTVTDGNGGSVPASQSFTLDAVNDAPVLSGNAATLSAGTEDTPYTFSSADLLA
GFTDVDGDQLSVASLTANHGALVDNNNGSWTFTPDANYNGPVSLSYSVTDGNGGSVPASQ
SFTLDAVNDAPVLSGNAATLSAGSEDTPYTFNSADLLAGFTDVDGDQLSVAGLTADHGAL
IDNNDGTWTFTPDANYNGPVSLSYTVTDGNGGSVPASQSFTLTAVNDAPVHSGNAATLSA
GSEDTPYTFSSADLLAGFTDVDGDQLSVASLTANHGALVDNNDGTWSFTPDANYNGPVSL
SYTVTDGNGGSVPASQSFTLDAVNDAPVLSGNAATLSAGSEDTPYTFNTADLLAGFTDVD
ADQLSVAGLSADHGALVDNNNGSWTFTPDANYNGPVSLSYTVTDGNGGSVPATQSFTLDA
VNDAPVLSGNAATLSAGTEDTPYTFNSADLLAGFTDVDGDQLSVSGLTANHGALVDNNDG
TWSFTPDANYNGPVSLSYSVTDGNGGSVPATQSFTLDAVNDAPVLSGNPATLAAGTEDTP
YTFNSADLLAGFTDVDGDQLSVAGLTAEHGALVDNNDGTWTFTPDANYNGPVSLSYTVTD
GNGGSVPASQSFTLGAVNDAPTEVLLSNTVTSTPENGVVIKVADIAVTDLDSGNNVLSLS
GSDAASFTILNGALYFNGGADFEAKAGYDVTVDVNDATVGGTPDASHNFHLGITDVIESD
SDTSNDHDTDTATATTTNWGETNGIDTKVGNAADNTISGGNSGDILYGQAGNDTLNGNNG
VDKLYGQAGNDILIGSQGLDTLYGGSGNDTLSGSAEQDELWGGSGNDTFVFTTGDSMSVS
PDTIRDFHHGFDKIDVSGLDATANPGDQAFAWGGTTVTAHGAWYTESGGNTILHFDTNGD
ANTDETTIVLTGTNLGLTDSDFLL
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacgacagtttcaggcacgaccgtcacgttttcgaattcaggtgcggcagcc
aatgtgacacaatccggcaccgaggacggcagccttcagttcacgttcgacgtcctgacc
gcaagcggcggcggcgtgaagacgacgatctattcggtggatgacggcgtcaagaacgat
gacggaggggcagcgatcatcgtcaccaacaaggcgtttgtcgattacaacaaggacctg
ctgatgcaggacggcgtgggcattagcttcagccaaaccagccagatgggagcaacattc
tggatcggcagtgacaacaagatccactacgacgcagccggtctaagcgcgcagatcaac
gcgctcgatgccggagaaaccttcaccgacacgatccagtacacgatcaagatgtcgaac
ggcacgctcagcgtcggcacgctgacggttgtgatcaacggcatcaacgacgcccccgtc
ctcagcggcaacccagcgacgctcgcggcaggcgccgaggacacggcctacacgttcagc
accgctgacctgctggccggcttcaccgatgtcgacggcgaccagctgtcggtcgccggc
ctcaccgccgaccatggcgccctcatcgacaacaatgacggcagctggaccttcacacct
gatgccaactacaacggcccggtcagcctcagctactccgtcatcgacggcaatggcggc
agtgtgccggcaagccagagcttcacgcttgatgcggtcaacgacgcgccggttctcagc
ggcaatgcggcgacgctggtcgcaggcactgaggacacgccctacaccttcagcagcgcc
gacctgctggccggctttaccgatgtcgacggcgatcagctgtcggtctccggcctcacc
gccgaccatggcgcgctgatcgacaacaatgacggcacctggacattcacacctgatgcc
aactacaacggcccagtcagcctcagctactccgtcatcgacggcaatggcggcagtgtc
ccggcaacgcagagcttcacgcttgatgccgtcaacgatgcaccggtcctcagcggcaac
ccagcaacgctttcggcaggcagcgaggacacgccctacacgttcaacaccgccgacctg
cttgccggcttcaccgatgtcgatggcgaccagctgtcggtctccggcctgaccgccaat
catggcgccctcatcgacaacaatgacggcacctggaccttcacgcctgatgccaactac
aacggcccggtcagcctcagctacaccgtcaccgacggcaatggcggcagtgtcccggca
agccagagcttcacgctggatgcggtcaacgacgcacctgttctcagcggcaatgcggcg
acgctttcggcaggcaccgaggacacgccctacaccttcagcagcgccgacctgctggcc
ggcttcaccgatgtcgacggcgatcagttgtcggtcgccagcctcaccgctaatcatggc
gcactggtcgacaacaacaacggcagctggaccttcacgccggatgccaactacaacggc
ccggtcagcctcagctactccgtcaccgacggcaatggcggcagtgtcccggcaagccag
agcttcacgcttgatgccgtcaacgacgcgccggtcctcagcggcaatgcagcaacgctt
tcggcaggcagcgaggacacgccctacaccttcaacagcgccgacctgctggccggcttc
accgatgtcgacggcgaccagctgtcggtcgccggcctcaccgccgaccatggcgcgctc
atcgacaacaatgacggcacctggaccttcacgccggatgccaactacaacggcccggtc
agcctcagctacaccgtcaccgacggcaacggcggcagtgtgccggcaagccagagcttc
acgctgactgcggtcaacgatgcacctgttcacagcggtaatgcggcaacgctttcggca
ggcagcgaggacacgccctacaccttcagcagcgctgacctgcttgccggcttcaccgat
gtcgacggcgatcagttgtcggtcgccagcctcaccgctaatcatggcgcactggtcgac
aacaatgacggcacctggagcttcacgccggatgccaactacaacggcccggtcagcctc
agctacaccgtcaccgacggcaatggcggcagtgtcccggcaagccagagcttcacgctg
gatgcggtcaacgacgcacctgttctcagcggcaatgcggcgacgctttcggcaggcagc
gaggacacgccctacacgttcaacaccgccgacctgcttgccggcttcaccgatgtcgac
gctgaccagctgtcggtcgccggcctcagcgccgaccatggcgcgctggtcgacaacaac
aacggcagctggaccttcacgccggatgccaactacaacggcccggtcagcctcagctac
accgtcaccgatggaaacggcggcagtgtgccggcaacgcagagcttcacgcttgatgcc
gtcaatgacgcgccggttctcagcggcaatgcggcaacgctttcggcgggcaccgaggac
acgccctacacgttcaacagcgctgacctgctggccggcttcaccgatgtcgatggcgat
cagctgtcggtctccggcctcaccgccaatcatggcgcgctggtcgacaacaatgacggc
acctggagcttcacgcctgatgccaactacaacggcccggtcagcctcagctacagcgtc
accgacggcaatggcggcagtgtcccggcaacgcagagcttcacgcttgatgccgtcaac
gacgcccccgtcctcagcggcaacccagcgaccctggcggcaggcaccgaggacacgccc
tacaccttcaacagcgccgacctgcttgccggcttcaccgatgtcgacggcgaccagctg
tcggttgccggcctcaccgccgagcatggcgcgctggtcgacaacaatgacggcacctgg
accttcacgcctgatgccaactacaacggcccggtcagcctcagctacaccgtcaccgac
ggcaatggcggcagtgtcccggcaagccagagcttcacgcttggtgcggtcaacgatgcg
ccgacggaggttctgttgtcgaacacagtgacgtcgacgcccgaaaatggggtcgtgatc
aaagttgccgatatcgcggtcaccgatctcgattccggaaacaacgtgctgtcgctgtct
ggaagtgacgccgcctcattcacgatcctgaacggcgcgctgtacttcaacggtggcgcg
gacttcgaagcgaaggccggctacgacgtgaccgttgatgtgaatgacgcaaccgttggc
ggcacgccggatgcctcgcataatttccatctcggcatcaccgacgtgatcgaaagcgac
agcgatacgagcaatgaccacgacacggacacagcgaccgccacgacgacaaattggggc
gaaaccaacggtatcgataccaaggtcggaaatgcggctgacaatacgatcagcggcggc
aattctggtgatatcctctatggccaggcaggtaacgacacgctgaatggaaataacggg
gtcgataagctctacggccaggccggtaacgacatactgatcggaagccaaggcttggac
acgttgtacgggggctccggcaacgacacgctcagtggcagcgccgagcaggatgagctt
tggggtggctccggcaatgacacatttgtgtttactaccggcgacagcatgtccgtctcc
ccggacacgatccgtgacttccaccatgggtttgacaagatcgatgtgagcgggctcgac
gccacggccaaccccggcgatcaagccttcgcctggggtggaacaacggtgacggcccac
ggtgcctggtacacggaaagcggcggcaacacgatccttcacttcgataccaacggggac
gcgaataccgacgaaacgacgatcgtcttgacaggcacaaatctgggtttgacggattcg
gacttcctcctctga
DBGET
integrated database retrieval system
