Rhizobium etli bv. mimosae IE4771: IE4771_CH03094
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Entry
IE4771_CH03094 CDS
T03310
Name
(GenBank) exonuclease RNase T/DNA polymerase III protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei03030
DNA replication
rei03430
Mismatch repair
rei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IE4771_CH03094
03430 Mismatch repair
IE4771_CH03094
03440 Homologous recombination
IE4771_CH03094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rei03032
]
IE4771_CH03094
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_CH03094
Enzymes [BR:
rei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IE4771_CH03094
DNA replication proteins [BR:
rei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IE4771_CH03094
DNA repair and recombination proteins [BR:
rei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IE4771_CH03094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Dit_C
Motif
Other DBs
NCBI-ProteinID:
AIC28187
UniProt:
A0A060I2Z8
LinkDB
All DBs
Position
complement(3057508..3058098)
Genome browser
AA seq
196 aa
AA seq
DB search
MKTIAIDFETANEQRGSACSVGLAWIEEGRVTRVEERLIRPREMRFSGMNIAIHGIRPED
VEDAPEFPEVTDEFHDDFRGATMIAHNAAFDFSVWRASLDLYRQSYPELTYLCSLKMAQR
IWPHFLSHRLNLIAEHLGLRFMHHNAAEDAAVCAAAAIEMAKAVKAKAVEAIPALIGMTP
GRLTARGYAPCTCRKA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccattgcgattgatttcgagacggcgaacgagcagcgcggcagcgcctgttcc
gtgggccttgcctggatcgaagaaggcagggtgacacgcgtcgaggaacggctcatccgg
ccgcgggagatgcgcttttccgggatgaacatcgccattcacggcatccggccggaagat
gtcgaggatgcgccggagtttcccgaggtgacggatgagttccatgacgatttcaggggc
gcgacgatgattgcgcataatgccgccttcgatttcagcgtctggcgggcgagcctcgat
ctctaccggcagtcctatcccgaactgacctacctttgcagcctgaagatggcgcagcgg
atctggccgcattttctctcgcaccggctgaacctgatcgccgagcatctcggcctgcgc
ttcatgcaccacaacgccgccgaggatgccgccgtctgcgcggcagcggcgatcgagatg
gccaaggcagtcaaggcgaaagccgtcgaggcgatcccggcactgatcggcatgacgccg
gggcggctgacggcgcgcggctatgccccctgcacttgccgaaaggcctga
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