Rhizobium etli bv. mimosae IE4771: IE4771_CH03106
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Entry
IE4771_CH03106 CDS
T03310
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei00470
D-Amino acid metabolism
rei00550
Peptidoglycan biosynthesis
rei01100
Metabolic pathways
rei01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IE4771_CH03106 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IE4771_CH03106 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IE4771_CH03106 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rei01011
]
IE4771_CH03106 (ddl)
Enzymes [BR:
rei01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IE4771_CH03106 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rei01011
]
Precursor biosynthesis
Amino acid ligase
IE4771_CH03106 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
ATP-grasp_3
CPSase_L_D2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AIC28197
UniProt:
A0A060I303
LinkDB
All DBs
Position
complement(3070159..3071085)
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AA seq
308 aa
AA seq
DB search
MSRKHVAVLMGGFSSERPVSLSSGKACAAALEAEGFKVTCIDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKLVAAAAGIPVAESQVVNR
FAFPSAHPMRPPYVVKPVREGSSFGVVIVTEDQAHPPQVVSSPEWHYGEDVLVERYVYGR
ELTCGVMGETALGVTEVVPLGHNFYDYDSKYAVGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaacggcccgtcagc
ctttcctcgggaaaggcttgcgcagcagccctcgaagccgaaggcttcaaggtgacgtgc
atcgatgtcgcgcgcgacgtttccgagaagcttgcggcgttgaagcctgatgtcgtcttc
aacgcacttcacggccccttcggcgaagatggtacgattcagggcatcctcgaatatctc
gaaattccctatacgcattcgggcgtgctcgcctcggcgttggcgatggacaaggacaag
gcaaagcttgtcgctgccgctgccggcattccggttgccgaatcacaggtcgtcaaccgt
ttcgcctttccttcagcgcatccgatgaggccgccctatgtggtgaagccggttcgcgaa
gggtcgagcttcggcgtcgtcatcgtcacggaagatcaggcgcatccgccgcaggtcgtc
agctcgcccgagtggcactatggcgaggacgttcttgtcgagcgctatgtctacggccgc
gaactgacctgcggtgtcatgggcgagactgcgcttggcgtcaccgaggtggtgccgctg
ggacacaatttctatgattacgattccaagtatgcggtgggcggttcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggccctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggaggtcaatacccagcctggcatgactccaacctcg
ctcgtgcccgaaatggccggccatgccggttattcctttggtgaatttctccggtggatg
gtggaggacgcgtcttgtttgcgttga
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