Rhizobium etli bv. mimosae IE4771: IE4771_CH03738
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Entry
IE4771_CH03738 CDS
T03310
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IE4771_CH03738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_CH03738
DNA repair and recombination proteins [BR:
rei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IE4771_CH03738
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AIC28809
UniProt:
A0A060I4X5
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All DBs
Position
3718335..3719144
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AA seq
269 aa
AA seq
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MALRPYWRGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGKEVKE
EDEVKGYQRGENEYVILEDEELENVALESTKTIDISTFTPRESIDWIWLDTPYYLSPNDP
VGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSYF
EAVGDENADSDMMPLVQQLIKKQTKDWSPKMVADPVQERLLEIIAAKKKSLKKPAKSKGK
SAPSAPPNNVVNIMDALKKSVAAEKRTGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggctctacgtccctattggcggggctatctcaagctctcgctcgtcacttgcccggta
cagatgatgccggccacctccgaaagcgagaaggtccgcttccacacgctcaatcgccag
acccagaaccgcgtcgtcagccactacgtcgattccgttaccggcaaggaggtcaaggaa
gaggacgaggttaaaggctatcagcgcggagagaacgagtacgtcattctcgaggacgaa
gagctcgagaacgttgctctcgaaagcaccaaaacgattgatatctctaccttcacgccc
cgcgaaagcatcgattggatctggctcgacacgccttattatctctcgccgaatgatccg
gtcgggcaggaagccttctccgtcatccgtgacgcgatggaggcccagaatatggtgggg
atttcccgcctggtgatctcgcgacgcgagcgcgccgtcatgctcgagccgcgcggcaag
ggtatcgtcctgtggacgctgcgctacggcgacgaggtccgcgatgaagacagctatttc
gaggcagtcggcgatgaaaacgccgattccgacatgatgccgctcgtccagcaattgatc
aaaaagcagacgaaggactggagcccgaagatggtggccgacccggtacaggagcgcctg
cttgagatcatcgccgccaaaaagaagagcctcaagaaacctgccaaatccaagggcaaa
tctgcgccgtcggctccgccgaacaacgtggtcaacatcatggatgctttgaagaaatcg
gttgcggctgaaaagcggaccggcagatga
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