Rhizobium etli bv. mimosae IE4771: IE4771_CH04113
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Entry
IE4771_CH04113 CDS
T03310
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei00300
Lysine biosynthesis
rei00470
D-Amino acid metabolism
rei01100
Metabolic pathways
rei01110
Biosynthesis of secondary metabolites
rei01120
Microbial metabolism in diverse environments
rei01230
Biosynthesis of amino acids
Module
rei_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IE4771_CH04113 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IE4771_CH04113 (lysA)
Enzymes [BR:
rei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IE4771_CH04113 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIC29163
UniProt:
A0A060I1Y0
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All DBs
Position
4105555..4106823
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AA seq
422 aa
AA seq
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MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVIEVLYVKDSGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PRPGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHAIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgcgacggcatccttcacgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacgccgttctacgtctattccaccgcgaccctggaacgccat
taccgggtcttctccgaagccttcgccgatatggactcgatggtctgttacgcgatgaag
gcgaactcgaaccaggcggtgctgaagacgctgggtcgccttggcgccggcatcgacgtc
gtctcggaaggggaactgcgccgcgcgctcgcagccgacattccggcaagccgcatcatg
ttttcaggcgtcggcaagaccccatccgagatggatttcgcgctcgaggccggcatctac
tgcttcaacgtcgaatccgaacccgagctcgaaatcctcaaccaacgcgccgtcagcgcc
ggaaagaaggctcctgtctccttccgcatcaacccggatgtcgacgcaaagacgcattcg
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcg
atctacgcccacgccgccaagctgcccggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcccttcgacgacgctttcaagctgctgcgcgacctt
gtcgcgacgctccgcgccgatggccacacgatcgaccacgtcgatatcggcggcggcctc
ggcgtgccctataaggacgacaacaatccgccgccgctgccggatgcctatgcagcgatc
gtcaagaaccagctgcgcgatctgaattgcaaggtcatcaccgagcccggccgcctgatc
gtcggcaatgccggaatcctcgtgatcgaggtgctttatgtgaaggacagcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaatgatctcattcgcccgaccctctacgaggcc
tatcacgaaatccgcccggtgacgatttcggcggcgaacgcgccgcgcatccgcgccgac
gtcgtcggcccggtctgcgagactggcgactatctggcgctcgaccgcgaaatggcgatg
ccgcggcccggtgatctgctggccgtcagcacggccggcgcctatggcgccgtccaggcc
ggcacctataacagccgcttgctggtccccgaagtcctggtcaagggcagcgatttccat
gcgatacgaccgcgtagaacctatgccgagctgatcagtctcgactccgttcccgcctgg
ctcgactaa
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