Rhizobium etli bv. mimosae IE4771: IE4771_CH04289
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Entry
IE4771_CH04289 CDS
T03310
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei00300
Lysine biosynthesis
rei00470
D-Amino acid metabolism
rei01100
Metabolic pathways
rei01110
Biosynthesis of secondary metabolites
rei01120
Microbial metabolism in diverse environments
rei01230
Biosynthesis of amino acids
Module
rei_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IE4771_CH04289 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IE4771_CH04289 (dapF)
Enzymes [BR:
rei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IE4771_CH04289 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AIC29336
UniProt:
A0A060IC97
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All DBs
Position
complement(4278730..4279635)
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AA seq
301 aa
AA seq
DB search
MSTTVEFARMNGLGNKILVVDMRGRPDKVTAAAAVALNADPETAFDQIMAIHDPKADGTD
AFIDILNSDGSKAQACGNGTRCVVQALAAETGRKAFTFQTVAGILNAVEHEDGTISVDMG
KPVFDWDRIPLAEEFHDTSRIELQIGPIDNPVLHSPSAMSMGNPHAIFWVDKDVMSYDLA
RFGPLLENHPMFPERANITLAQVTSPTSMTTRTWERGAGLTLACGSAACSAAVSAARTGR
TGRRVMINVASAKPPGTLSIEWRERDDHVIMTGPAEWEWSGRLDPATGLWSGDADRGAEA
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacggtcgaattcgcgaggatgaacgggcttggcaacaagatcctggtcgtc
gacatgcgcggacggccggacaaggtaacggcagcggcggccgtcgcgctcaatgctgat
cctgagaccgcgttcgaccagatcatggcgatccatgatccgaaggctgacggcactgac
gccttcatcgatatcctgaattccgacggctcgaaggcgcaggcctgcggcaacggcaca
cgctgcgtcgtgcaggcgcttgccgccgagaccggccgaaaggccttcaccttccagacg
gtagctggcattctcaacgccgtcgagcacgaggacgggacgatctccgtcgatatgggc
aagccggtcttcgattgggacaggatcccgctggccgaagaattccacgacaccagccgc
atcgaactgcagatcggcccgatcgacaatccggtgctgcattcaccgtctgccatgtcg
atgggcaacccgcatgcgatcttctgggtggacaaggacgtgatgtcctatgatctcgcc
cgcttcgggccgctgctggaaaaccatccaatgtttcccgagcgcgccaacatcactctg
gcgcaggtgacctcgccgacgtcgatgacgacgcgcacctgggagcgcggcgcgggtctg
acgctcgcctgcggttcggccgcctgttccgccgccgtcagcgccgcgcgcaccggccgc
accggccgcagggtgatgatcaacgtggcgagcgccaagccgccgggcacgctttcgatc
gaatggcgcgagcgcgacgatcatgtcatcatgaccggtccggccgaatgggagtggtcg
ggcaggctcgatcctgcgaccggcctctggtcgggcgatgcggaccggggagccgaggcg
cagtga
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