Rhizobium etli bv. mimosae IE4771: IE4771_PA00004
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Entry
IE4771_PA00004 CDS
T03310
Name
(GenBank) DNA/RNA helicase domain-containing protein
Organism
rei
Rhizobium etli bv. mimosae IE4771
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GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_22
CaMBD
Motif
Other DBs
NCBI-ProteinID:
AIC29511
UniProt:
A0A060ICS6
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Position
pRetIE4771a:complement(5968..9618)
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AA seq
1216 aa
AA seq
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MPEFDDDRLDVADTLRRALAIENELSRQQARAYVRCLQTTWQVPAIQWTDRESARQLADS
RRLLHAAHIFRQIEGTSSPRAIDCYRRTGEILEWLSRAADGLRSIVPIELLAAAAYQLGG
LPAMASGLLRQVETDHEGVALYSAFLRADFDGVIRRSSAFWNAHPDMTEPDASRRLAAAG
VEEFGLDEDEHRVAWFFTVELVRSLGLIADSLRRGDDARLELAMSKLHALDEMAARTFSD
DASLVIALMRHVADGYKAASIYQPLRALAALNPARTGKLAAYARDQFSRGRGILWTSQLQ
GLARLLRDSSFALCTPTGSGKTLVANMALLKELLLREYDGLAPLAIYLVPSRALAGEVEA
KLRAELGSEMTITGLYGGADWGITDYWLTGDQPTVLIATVEKADALMRYLGPILAARLRL
LILDEAHQVVPEANDNTRVSFSDHSNRAIRLENFVSRVIAQRPDVVRIALTAVAGGAALP
VARWVEGRADAEAVGVRYRSTRQVIGVLETAPNATGRILLDIMNGRTLYVRGQEQPVYLP
LRMQPMPQLPAAMRNSLNRFNCLSVLWTALHLVDEDQRILISVAQEPEQTMRWFKEALEL
NAWAAVPPFAAPDGRDRERFDEARAACIDYCGEGSFELFLLDRGIASSHGQMPQRLRRLM
VEMIERRICPITVATATLTEGVNLPFDLIFLTSLKRRSWDQVTQNQVVAPLSTAEFRNLA
GRAGRPGAAKGIEGMTLVALPTQVSSTAQATIPVQRRQLRELQTDYDRLRASLLIEEMDA
DEAESPLALLLNTIRDRAERLLGVDPDDFIDWLEQALPADISDEAGEGSTDSHSRFADTL
DELDGVLLTAIEEVARADGADMAGPRAEAHLVALWRTTFTAAAAVQELWLEQAFVKRGRA
IVETVYPDAEERRRLYQYGFSPLVGRRFEAIAPRLRALVAAATTYGEDNATARIDVFEAI
GDLLAADRGFGFRVRPTDTDQALLRRWADVLGWWMHEPDTAAPAADDLRAWQRFVADNLE
FRLGVAVGAVVAQAWSEGAADPFAVPTLADWKDTTGLPWFGFWARELLRWGTHDPFVAFA
LSQNLAQTREAAAARREEFEAWLNEEFDGIESEDLIDPQLFLQWQSTLPRRTQEGAVAQP
EPVALTGTDGRRQRYNVIPIADGAVVRWLDPAGFELARSENIVGEFDDRLITSDYELRSG
RQGSAVHRTFSTGSRA
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttcgacgatgaccgcctagatgttgccgacaccctgcgccgcgcgctggcc
attgagaatgaactgtcgcgccaacaagcccgggcatacgtgcgctgcctccaaaccacg
tggcaggttccggccattcagtggacggatcgggagtccgccaggcaattggcagactcc
cgccgcttgcttcatgcagcgcatatttttcggcagatcgagggaacgtcctcgcctcgg
gcaatcgactgctaccgcagaacaggcgagattttggagtggctctcgcgcgcagccgat
ggccttcgttcgatcgtcccaatcgagctgctcgcggccgccgcatatcaacttggaggc
ctgccagcaatggcgtcaggccttctcaggcaggtcgagaccgatcacgaaggtgtcgcg
ctttattccgcatttttgagagcggatttcgacggggtcattcgtcgatcctctgccttc
tggaacgcgcatcccgacatgaccgaaccggacgcatcgcgacgcctcgccgcggctggg
gttgaagaattcggactggacgaagacgaacatcgagttgcttggtttttcaccgtcgaa
ctcgtccgcagtctcggtttaatcgccgacagccttcgccgtggcgacgatgcgaggctt
gagctcgcaatgtcgaagctccatgcgctcgacgaaatggccgcgaggacgttcagcgac
gatgcctcgctggtgattgcgctcatgcgacacgtcgcagatggctacaaagcagccagc
atctaccagccgctgcgtgcactcgcagcgctgaaccccgcgagaaccggaaagcttgcg
gcatatgcccgcgaccagttcagccgcggtcgcggaattctatggacatcccagctccag
ggcctcgcccgacttctgcgtgactcgtcgtttgcactctgcactccgaccggttcggga
aagacgctggttgcaaacatggcacttctcaaggagctgctgcttcgcgaatacgatggc
cttgctccgctcgccatctatctcgttccatcccgcgcgctcgccggtgaggtcgaagca
aagcttcgcgccgaactcggaagcgaaatgaccattactggtctgtacggtggcgctgat
tggggcattaccgactattggctcaccggagaccagccgacggtcctgattgcgaccgtc
gagaaagccgatgcgctcatgcgctatctcgggccgatcctcgcggctcgtctgcggctc
ctcattctcgatgaggcccatcaggtcgtgccagaggctaacgacaatacgcgcgtcagc
ttctcagaccacagcaaccgagcgatccggttggagaacttcgtttcgcgtgtaatcgcg
caacgacccgacgtggtgcggatcgcgctgaccgccgtggctggtggcgccgcacttcca
gttgctcgttgggtcgaagggcgcgccgatgcagaagcggtgggcgtgcgctatcgcagc
acgcggcaggtcatcggtgtcctcgaaaccgcccccaacgcgaccggtcgaattctcctc
gatatcatgaacggccggacgctctacgtgcgcggccaagaacaaccggtctatcttccg
cttcgcatgcagccgatgccccagctcccggctgccatgcgcaacagcctcaatcgcttt
aactgcctcagcgttctgtggaccgcgctccatctcgttgatgaggatcagcgaattttg
atttctgtcgcgcaggagcccgaacaaacgatgcgctggttcaaggaggctctggaactc
aatgcatgggctgccgtcccgcccttcgccgcgcctgacggtcgcgatcgcgagcggttc
gatgaggcgcgagcagcctgtatcgattattgcggcgaaggctcgttcgagctgtttctc
ctcgatagagggatcgcgtccagccacggtcaaatgccgcaacgcttgcggcgactgatg
gtcgagatgatcgagcggcggatttgcccgattaccgtcgccaccgcgacgctgacagaa
ggcgtaaatcttcccttcgatctgatctttctgacatcgcttaagcggcgttcatgggat
caggtaacccaaaaccaggttgtcgccccgctatcgacagccgaattccgcaacctcgct
gggcgagccggaagaccgggcgcggcgaaagggatcgaaggcatgaccctcgtcgcacta
ccgacgcaggtgtcatccaccgcgcaagcaactatccccgttcagcgtcgccaactccgc
gagctgcagacggactatgaccgcctgcgcgcctctcttctgatcgaagaaatggatgcc
gatgaagccgaaagcccattggcgctacttctcaacacgatccgcgatcgtgcggagcga
ttgctcggcgtggatcccgacgacttcatagactggctcgaacaggcgctgcccgccgat
atcagtgacgaagcgggcgaaggttcaaccgattcccattcccgctttgctgatacgctc
gacgagctcgatggcgtgttgttgaccgcgatcgaagaagttgcgcgcgctgatggagcc
gatatggccggtccgagggccgaggcccatctcgtggcgttgtggcgaacgacattcacc
gccgccgcagcggtccaggaactttggctcgagcaagcgttcgtgaaacgaggtcgagcg
atcgtcgagacggtttatcccgacgcggaggaacgccgacggctctatcaatatggcttc
tcgcccttggttggccgccgcttcgaggcgatcgctcctcgtcttcgcgcgctcgtcgca
gcagcaacaacctacggcgaagacaacgctacggcccgcatcgatgtctttgaggcgatc
ggtgacctgctcgcagctgaccgcggcttcggcttccgcgtgcgaccgaccgatacggat
caggcgctcctacggcgctgggctgacgtgttggggtggtggatgcacgaacctgacaca
gcggcgccggccgcggatgacctgcgtgcctggcagcgcttcgtggccgacaatctggag
tttcggcttggggtggccgtcggggctgtcgttgctcaggcgtggtctgagggtgcagcg
gacccgttcgcggttccaacgctcgcggactggaaggacaccaccggattgccctggttc
ggtttctgggcgcgtgagcttttaaggtggggaacccacgatccctttgtcgccttcgcc
ctgtcgcaaaatctcgcgcagacacgtgaagcggcggccgcgcgacgggaggagttcgag
gcctggctcaacgaggaattcgacggcattgagtccgaagacctcatcgaccctcagctt
ttcctccaatggcagagtaccctgccgcgccggacgcaggaaggtgcggtcgcccagccc
gaaccggttgctcttaccggaaccgacggccgtcgccaacgatacaacgtcatcccgatc
gccgatggcgccgtcgtgcgctggctcgatccggctgggttcgagcttgcacgctccgag
aacatcgtaggtgaattcgacgaccgactgataacaagtgactatgagcttcgctccggc
cgacagggatcagccgtgcataggacgttttctacaggatctcgggcatag
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