Rhizobium etli bv. mimosae IE4771: IE4771_PB00109
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Entry
IE4771_PB00109 CDS
T03310
Symbol
nifA-1
Name
(GenBank) Nif-specific regulatory protein NifA 1
KO
K02584
Nif-specific regulatory protein
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IE4771_PB00109 (nifA-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rei03000
]
IE4771_PB00109 (nifA-1)
Transcription factors [BR:
rei03000
]
Prokaryotic type
Helix-turn-helix
Other families
IE4771_PB00109 (nifA-1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
GAF_2
Mg_chelatase
AAA
AAA_3
AAA_16
GAF_3
NACHT
Fer4_23
TIP49
Motif
Other DBs
NCBI-ProteinID:
AIC29840
UniProt:
A0A060ICP4
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All DBs
Position
pRetIE4771b:complement(100385..102112)
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AA seq
575 aa
AA seq
DB search
MANVLRNRADEVEQLPKLSNNMPKTELLLGGIYKISKLLTALMPLETTLANVAKALPSLL
RMRSGAIIVLAARGEPEFIASAGVSDPHLSRAGNVRPAIEKIVTTARVLVIPDTRNSELF
RANLKLSPSRDAIPIAFIGIPIRAGPETVGILWIDRVRDGADHDEDIGFLTMVADLVGQT
ISFHRTLNSSGTQVIQPRRKREAAQRNDPGTYPPVEMNFIAGESPALKQVLDIVSAVAMT
NTTVLLRGESGTGKEIFAQAIHELSHRRKKAFVKLNCAALPEGVLESELFGHEKGAFTGA
ASQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLKVDVRLICAT
NKDLEAAVSNGEFRADLYYRISVVPIVLPPLRERTGDIQQLSKIFLDRFNSENDRELAFT
APALDLISQCYFPGNVRELENCVRRTATLAHSTTIVPSDFACQKGQCLSSRLWKGSPGGV
RAINNLASAKTMPMLSPFSAEPCDTSTTEVPVAKCCDSNDPPGPTMSPCATKRDRLIDAM
EKAGWVQAKAARMLGLTPRQIGYALRQHQIEVKKF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtcctgcgcaaccgggccgatgaagttgaacagttgccgaagttatccaac
aacatgcccaaaacagagctcttgctcggcgggatttacaaaatatcgaaactcctgact
gctctcatgccgctggagacaacgctagctaatgtagcgaaggcgcttccttcactcctg
cgaatgcgttccggcgcaattatcgttctggccgcccgaggtgaaccggaattcattgca
tctgcgggggtttcagatccgcacctatccagagccggaaatgtccggccagcaatagag
aaaatcgtgactacggcgcgagtgcttgtcatacccgatacccgcaattccgagctattt
cgggccaatcttaaactctcgccgagccgcgacgccatcccaattgcgttcattggcatt
cctatccgggctggaccggaaacagttggaatattgtggatcgaccgcgtaagggacggt
gccgaccatgacgaagacattggcttcctgaccatggtcgccgatcttgtcgggcaaact
atttcatttcatcggaccctgaactcgagcggtacgcaggtcattcagccgagacggaag
cgcgaagccgcacaaagaaacgaccctggcacgtacccgcctgtcgagatgaattttatc
gcgggggaaagccctgcgctcaagcaagtactcgatatcgtgtctgccgttgcaatgacg
aataccaccgtacttctgcgaggcgaaagcgggaccggaaaggaaatctttgcgcaagca
attcacgagctttcccatcgccggaagaaggctttcgtcaaactgaactgcgccgcactg
cctgaaggtgtgctggaatcggagttgttcgggcatgaaaagggtgccttcacaggcgct
gcctcgcagcgagctggtcgcttcgaattggcaaatggcggaacgctgttacttgacgaa
ataggcgaaatctcgccagcctttcaagctaaactgttgcgcgttttgcaggaaggcgaa
ctagagcgggtcggtggaaccaagacgctcaaggtcgacgtccgcctaatctgtgccaca
aacaaggaccttgaggcagccgtctcaaatggggagttcagggctgacctttattaccgc
atcagtgtggtaccaatcgtcttaccgccacttagagagcgcaccggggacatccagcaa
ctttcaaaaattttcctcgaccgcttcaacagcgaaaacgatcgtgagctcgccttcacg
gcgccggcgctagatctgatctctcaatgttactttcctgggaacgtccgtgaactggaa
aattgcgtccgaaggaccgccaccttggcgcactcaacaacaattgtgccgtcggatttt
gcgtgtcagaaaggtcagtgcctttcttcacgtctttggaagggaagtcccggtggcgtt
agggccattaataacttagcgtcggccaaaactatgccgatgctttcaccgttctcggcc
gagccctgcgacacctcaacgacagaggttccggtagccaaatgttgcgattcgaatgac
ccgcctggcccaacaatgtcgccgtgcgcgacaaagcgcgaccgcctaatcgacgcgatg
gaaaaggctggttgggttcaggccaaggcagctcgcatgctcggcctcacgccgcgccag
atcgggtatgctctgcgccaacatcaaatcgaagtgaaaaaattctga
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