Rhizobium etli bv. mimosae IE4771: IE4771_PB00124
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Entry
IE4771_PB00124 CDS
T03310
Symbol
nodD-1
Name
(GenBank) transcriptional regulator nodulation protein NodD 1
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
rei
Rhizobium etli bv. mimosae IE4771
Module
rei_M00664
Nodulation
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rei03000
]
IE4771_PB00124 (nodD-1)
Transcription factors [BR:
rei03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IE4771_PB00124 (nodD-1)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AIC29855
UniProt:
A0A060ICR0
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All DBs
Position
pRetIE4771b:112091..113047
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AA seq
318 aa
AA seq
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MRFKGLDLNLLVALDALMTERNLTAAARRINLSQPAMSAAVARLRTYFRDDLFTMNGREL
VLSPRAEGLALAVREALLQIQLSIITWEPFNPAQSDRCFRIILSDYVTLVFFEKIIERAA
REAPAVSFEFRPPADDNEDLLRRGDVDLLILPEIFMSDAFPRSRLFDDVHVCVGCGSNKQ
LSEPLTFDRYMSMGHVVVGFGDTLRLGIEERYLLGHSCKRRIDVVVHGYSLIPPMLSETE
RIGTIPLRLAQHFAKTIPLQIVELPLPQHLPFTEAVQWPALHTSDPASLWIRELLVEEAS
RMVSPHLPDPNDYSPARV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcaaaggcctggacttaaatctcttagttgcgctagacgccttgatgaccgag
cgcaacctcactgcggcggcccgccgtatcaacttaagccagccggccatgagcgcggcc
gtcgcccggttgcgcacctatttccgcgatgatctctttacgatgaacggccgagaactc
gttctatctccgcgtgcggaaggactcgccttggcggtccgagaagctctgctgcagatc
caactatctatcattacatgggagcctttcaacccggctcaatcggaccggtgctttagg
atcatcctttccgactacgttacactcgtattcttcgagaagatcatagagcgcgcagcg
cgggaagctcctgctgtgagcttcgagtttcggcctcctgctgacgacaatgaggacctc
ctccggcgcggtgacgttgatctactgattctgccggaaatattcatgtcggatgccttc
cccagatcgagactgttcgacgatgtccacgtgtgtgtgggctgtggctcgaacaagcag
ctgtcagagccgctaacattcgacagatacatgtcgatgggacacgtcgtcgtcgggttc
ggcgataccctgaggctaggcatcgaggaacgatatctgctcgggcacagttgcaagaga
cggatcgacgtcgtcgtacacggctacagtttgattccgcctatgctttcggaaaccgag
cggataggaaccatccccctgcggctggcgcagcatttcgcaaaaacaataccgttgcag
atcgttgagcttccgctgccacaacacctgccgttcaccgaggccgttcaatggcctgcg
cttcacaccagtgatccggcaagcctctggatccgtgagctgttggtagaggaggcgtcg
cgcatggtttcgccacacctgccagacccaaacgattattctcccgctcgggtctga
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