Rhizobium etli bv. mimosae IE4771: IE4771_PB00190
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Entry
IE4771_PB00190 CDS
T03310
Symbol
rpoN-2
Name
(GenBank) RNA polymerase sigma-54 factor RpoN 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei02020
Two-component system
rei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IE4771_PB00190 (rpoN-2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IE4771_PB00190 (rpoN-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rei03021
]
IE4771_PB00190 (rpoN-2)
Transcription machinery [BR:
rei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IE4771_PB00190 (rpoN-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AIC29921
UniProt:
A0A060IDZ2
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All DBs
Position
pRetIE4771b:complement(176165..177616)
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AA seq
483 aa
AA seq
DB search
MKSFTSLHQRQQQSLVITPQLIESIRLLQLAHTELHQFVEQEIEKNPFLDLASNDGGAPG
DASSVPVEDPNIGVREDHVDRPARTDMPELSSPWKSTRDTGNLPPGERPSLDEFTASTET
LHEHVAHQIALTAFTPQERLIAGALADHLEDTGYLQANLPELAGRLNIHEAYVERVLGAL
QLFDPPGVFARNLSECLEIQLRQRDRFDPAMEALVANLELLARRDFRTLKRRCRVDEDDL
LDMLNEIRALNPKPGNQFQSAGPESIIPDVSVMPSPGGGWHIELNRDILPKVLINQNYFA
EVTRLTAQSSKDQSFLNECFQNASWLVRSLDQRATTILKVATEIVRHQDVFLEDGIAHLR
PLNLRTIADAIDMHESTVSRVTSNKYMLTPRGVFELKYFFTVAIPSSQGGDAHSAEAVRH
QIRAMIAAETLDDVLSDDGIAARLKDTGVDIARRTVAKYREAMNIPSSAQRRREKRFVSA
AER
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctttacaagccttcatcagcgtcagcagcaatcgctggttattacaccccaa
ctcatcgagtctattcgcttgctgcagctggcgcacaccgaactgcatcagttcgtggaa
caggaaatagagaagaacccatttctcgacctggcgtcgaatgacggcggggctccaggc
gatgcatcgtcggttccggtggaagatccgaatattggtgtgcgcgaggaccacgttgat
cggccggccaggacggacatgcccgagctgtccagtccgtggaaatcaacccgcgacaca
ggcaacctcccgccgggcgaaaggccttcgctggacgagtttaccgcctcaaccgaaaca
ttgcacgagcatgtcgctcatcagatcgccctcaccgccttcacaccgcaggaacgcctg
attgctggggcgcttgccgatcatctggaagacactgggtatctgcaagcgaaccttccg
gagctcgccgggaggttgaacatccacgaggcttatgtggagcgggttctcggggccttg
cagctctttgatccaccgggagtttttgcgcggaatctcagcgaatgccttgagatacag
ttgcgtcagcgcgatcgcttcgatccggcaatggaagctctggtcgcaaatctcgagctg
cttgcgagacgcgattttcggacattgaaacgtcgctgccgggtggatgaagacgacctt
ctcgacatgttgaacgaaatccgtgcccttaatcccaagcctgggaaccaattccagtcc
gcagggccggaatccatcataccggacgtctccgtcatgccctcgcctggaggtggatgg
catatcgaacttaatcgggacatcctgcccaaggtgttgatcaaccagaactattttgcg
gaagttacgcgtctgaccgcccaaagctcaaaggatcagtcattcctcaacgaatgcttt
caaaacgcgagctggttggttcgcagtctcgatcagcgcgccacgacaattctcaaggtg
gcgaccgaaatcgtgcgccaccaggatgtctttctggaagatggcattgcccatctccgt
cctctcaatctcaggaccatcgctgacgcaatcgacatgcacgagtccactgtaagtcgg
gtgacgtcgaacaaatacatgctcacgcctcgcggtgtgttcgaactcaagtattttttc
acggtcgccatcccctcctcccaaggcggtgacgcgcactcggccgaagctgtgcgccat
cagatcagggcaatgattgccgcagaaacgctcgatgatgtgctctccgacgatggcatc
gctgccaggctcaaggacactggcgtagacattgctcgccgcacggtcgccaaatatcgc
gaagcgatgaacatcccctcgtccgcgcaacgccgccgggagaagcggtttgtatcggcg
gcggagcgataa
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