Rhizobium etli bv. mimosae IE4771: IE4771_PC00165
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Entry
IE4771_PC00165 CDS
T03310
Name
(GenBank) DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rei03032
]
IE4771_PC00165
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_PC00165
Enzymes [BR:
rei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IE4771_PC00165
DNA replication proteins [BR:
rei03032
]
Prokaryotic type
DNA Topoisomerases
IE4771_PC00165
DNA repair and recombination proteins [BR:
rei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IE4771_PC00165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIC30290
UniProt:
A0A060IE26
LinkDB
All DBs
Position
pRetIE4771c:194205..195212
Genome browser
AA seq
335 aa
AA seq
DB search
MNAEVITELGLIYVSDTEPGIRRRRKGKGFSYVMPDGTTLSDELQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFHQLIEFGRALPKIRRTVLRHL
DTGTEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESGALKPVDSGRLNAYLTEISGIPI
SAKTFRTWAGSLAAFGAAREKIVAGGRPTVKDMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIEAGNEPLRGLRAEENRLLDFLTREIEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagtcatcaccgaacttggcctcatctatgtcagcgataccgaaccgggc
atccgcagacgaaggaaaggcaagggcttcagctatgtcatgccggatggtacgacgctt
tccgatgagttgcagcgggcgcgcatcggcgcactcggcctgccgccggcctatgagaat
gtctggatctgtctctacgagaacggccacctccaggcgaccggcatcgatgcgcgcggg
cgcaagcaatatcgctatcacaaggactggcaatccttccgcagcgccggaaaattccac
cagctgatcgaattcggccgggcattgccgaagatccgccgcaccgtgctgcgccatctc
gacaccggtacggaagatgtcaacggcgtgctggcggcactgacgacgctgctcgacgag
gcgcatctgcgggtcggcaaccaggcctatgtcagggagaacggcacctatggtgcgacg
acgctattgaagcggcacttgaagattgtcgacggacggatcgagctgaaattccgcgcc
aagggcggcaagcgcgtccagcgcagcctcaagcatcccaggctgcagaagatcctggaa
gagatcgccgacctgcccggccgtcagcttttcgtctggaaggatgaaagcggcgcgctg
aaaccggtcgattccggccggctgaatgcctatctgaccgagatatcgggcattccgatt
tccgctaagacattccgcacctgggccggatcgttggcggccttcggtgcggcccgcgaa
aaaattgtcgccggtggccggccgacggtgaaggacatgtcggaggctgcggccgaagcg
ctgcacaatacgccggcaatctcacgctcgagctatatccatccggcaatcattgcgctc
gccggcaatgaccatccgttgatcgaggctggcaacgagccgctgcggggcttgcgggca
gaagaaaacaggctacttgatttcctgacacgcgagatcgaggaatga
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