Rhizobium etli bv. mimosae IE4771: IE4771_PD00238
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Entry
IE4771_PD00238 CDS
T03310
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IE4771_PD00238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rei02000
]
IE4771_PD00238
Transporters [BR:
rei02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IE4771_PD00238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIC30793
UniProt:
A0A060I717
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All DBs
Position
pRetIE4771d:complement(232512..234449)
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AA seq
645 aa
AA seq
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MPNEILSRGVTRRAVLGGMAGAAALSIAGRAFAAGGEAPALAQLVKDGKLPPLAERLPKK
PMVVTPFEKVGTYGGSLRRGLRGSSDHNGILRMVGNQSLVRWNLEFTAVQPNLAERWEVS
DDATQFTFHLIEGVRWSDGHPFTADDIVFAIEDCVKNTELYSATPAQLAVAGKPVTVEKI
DDYTVKFTFAAANALYLENLATPLGQHPTLFPKHYCSQFLPKYNPNLEADVKKAGVTSWT
ELFRSRCGDIEIPTRWGNVDKPTLDPWVVKEPYVGGATRVVMTRNPYFWQVDTAGNQLPY
IDEVNFGISQDVESLMLNVISGKIDIQERHISVLANKPTLSQNMQKGDYRLLTLVPSAAQ
QCQIYFNITHKDPAMRKMFADKSFRQALSIGINRPELIDIVYFGQSEPYQAGPRPTHPWY
NEKYARQFTEYDADKAGAMLDEAGYKKGGDGFRLRPDGQKVFFSIDVIPTLYPDLVDALE
LVKTHWAQIGIDMKVNTIERALYYTRGDDNAHDAAVWPGPGGLDPMLDPRDFFAFHPQGS
RYAIPWTLWYTSNGARGEEPPESQKKRMKLFDEARSTADLDKRGAIMKQIFDIAAEEFET
VGLCLAVGGFGIIRNNLRNVPEKEPDSWSWPNPGPAMPQQFTFTS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgaaattctgtctcgcggtgtcacccgccgcgccgttctcggcggcatggcc
ggcgctgcggcactgtccatcgccggtcgcgcttttgcggcgggaggtgaagcgccggcg
ttggcgcaactcgtcaaggatggaaaactgccgccgctcgccgagcgcttgccgaaaaag
ccgatggtggtgacgccgttcgaaaaggtcggcacctatggcggttcgctgcggcgcggc
ctgcgcggttcatcggaccataatggcatcctgcgcatggtcggcaaccagagcctcgta
cgctggaacctggaattcaccgccgtccagccgaacctggccgaacgctgggaggtcagc
gacgacgccacccaattcaccttccacctgatcgaaggcgtgcgctggtccgacggccat
cccttcacggccgacgacatcgtttttgcgatcgaagactgcgtcaagaataccgagctc
tacagcgccacgccggcgcagcttgccgtcgccggcaagccggtcaccgtcgagaagatc
gacgattacacggtgaagttcacctttgcagcggccaacgcgctttatctggaaaatctt
gccacgccgctcggccagcatccgacgctcttcccgaagcattactgcagccagttcctg
ccgaaatataatcccaacctcgaggccgatgtgaagaaggcgggggtcaccagctggacg
gaactgttccgcagccgctgcggcgacatcgaaattccgacgcgctggggcaatgtcgac
aagccgacgctcgatccctgggtcgtcaaggagccttatgtcggcggtgcgacccgcgtc
gtcatgacccgcaacccctatttctggcaggtcgataccgcaggcaaccagcttccctat
atcgacgaggtcaacttcggcatttcgcaggacgtcgaatcgctgatgctgaacgtcatc
tccggcaagatcgacatccaggagcgccacatcagcgtgctcgccaacaagccgacgctg
tcgcagaatatgcagaagggcgactaccgcctgctgacgctcgtgccgtcagccgcgcaa
cagtgccagatctacttcaacatcacccacaaagatcctgccatgcgcaagatgtttgcc
gacaagtcgttccggcaagcgctgtcgatcggcatcaatcgaccggaactgattgacatc
gtctatttcggacagagcgaaccctaccaggccgggccgcgtccgacccatccctggtac
aacgagaaatatgcgcgccagttcaccgaatatgacgccgacaaggccggcgcgatgctc
gatgaggccggctacaagaagggcggcgacggtttccgcctgcggcccgacggccagaag
gtattcttctcgatcgacgtcattccgacgctctatcccgacctcgtcgatgcgctggaa
ctggtcaagacgcattgggctcagatcggtatcgacatgaaggtcaacacgatcgagcgg
gcgctctattacacccgcggcgacgacaatgcccatgatgcggcggtgtggccgggtcct
ggcggtctcgatccgatgctcgacccgcgtgactttttcgccttccatccgcagggctcg
cgctacgccattccttggacgctctggtacacgtccaacggtgcgcgcggcgaggaaccg
ccggaaagccagaagaagcgcatgaagctgttcgacgaggcgcgttcgacggccgatctc
gacaagcgaggcgcgatcatgaagcagatcttcgatatcgcggcggaggaattcgagacc
gtcggcctctgccttgccgtcggcggcttcggcatcatccgcaacaatctgcgcaatgtt
cccgagaaggagccggacagctggtcctggcccaatccggggcctgcgatgccgcagcaa
ttcaccttcacgagctga
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