KEGG   Rhizobium etli bv. mimosae IE4771: IE4771_PE00270
Entry
IE4771_PE00270    CDS       T03310                                 
Symbol
vapC-5
Name
(GenBank) toxin-antitoxin system endonuclease protein VapC 5
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
rei  Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:rei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rei03016]
    IE4771_PE00270 (vapC-5)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rei02048]
    IE4771_PE00270 (vapC-5)
Transfer RNA biogenesis [BR:rei03016]
 Prokaryotic type
  tRNA degradation factors
   IE4771_PE00270 (vapC-5)
Prokaryotic defense system [BR:rei02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    IE4771_PE00270 (vapC-5)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: AIC31494
UniProt: A0A060ICY2
LinkDB
Position
pRetIE4771e:285642..286043
AA seq 133 aa
MPLYMLDTNMCIYLMKEQPPQVARRFAQCRVGDVVMSAITFAELEYGVSASTNAEKERAN
LEFLIEAIPVAPFDANAARAYGPVRFATRERKKDHLDKLIAAHALSIDAVLVTNNVRDFS
VYEGLPIENWLLS
NT seq 402 nt   +upstreamnt  +downstreamnt
atgccgctttatatgctcgacaccaatatgtgtatctacttgatgaaggagcagccgccg
caagtcgcgcgtcgctttgctcaatgccgtgttggcgacgtcgtcatgtcagccatcaca
tttgcggaacttgaatatggtgtctccgcatcgacgaacgcggaaaaggagcgggcaaac
ctggaattcctgatagaagcgattccagttgcgcccttcgacgccaatgcggcgcgggcc
tacgggcctgtcaggtttgccacgcgggaacggaaaaaagatcatctggacaaattgata
gccgctcatgcgctctcgattgatgctgtcctcgtaactaacaatgtgcgggacttttcc
gtctatgaagggttgccgatcgagaactggttgttgtcgtga

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