Rhizobium etli bv. mimosae IE4771: IE4771_PE00411
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Entry
IE4771_PE00411 CDS
T03310
Name
(GenBank) cadherin-like/VCBS repeat-containing protein
Organism
rei
Rhizobium etli bv. mimosae IE4771
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Big_7
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
AIC31635
UniProt:
A0A060IIA8
LinkDB
All DBs
Position
pRetIE4771e:430132..435255
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AA seq
1707 aa
AA seq
DB search
MDSLIPRWLAAGEKGRPRKPAETHADRAQLATSAQTADGKKHDGVLVDDPNEMPALAEHD
GEHRTGVIAEPDGQGSITQPLPPLLEPFAVDRETGDREGDTVASRLFAHGPGFAGFNENA
NGSRSPHYRSYPGMSLIGDDPLAPYLPQSPAATASAHDSASLAGERAPSGNVVILESSPS
AQASAQHGGANSLAFGMPFGVCGCGYFTSPTRILDWAHGGAMLQQDGQLQGTRLTEGPDF
VSTAKRAIAASISDPLLDRNLSPLSGWRGTASWTETTALNGSLPGGGETGTGTNTKGVGI
LSGSVTTPPTTQRSLTTQNQAAAAAAASNAIVLENQKPGNPESEWGIVGAGSSNIEGFAT
DISVDNGKTISFKINTNSTNYRIDIYRLGYYGGMGARKVATMQHTGLQTQPNPLRNATTG
TVDAGNWAVSASWTVPEDAVSGVYIAKLVRQDGTSGSNHIPFIVRDDSSQSDIVFQTADQ
TWHAYNGWGGANFYGGNGPATGQGAGRAYAVSYNRPIATRGGVGTFAGPQDYLFGAEYAG
IYWLEQNGYDVSYMAGVDADRYGSLLLNHKTYIDAGHDEYWSGQQRTNVEAARDAGVNLQ
FWSGNEVYWRTRWGNAYSADATPYRTLISYKETWSPSASIDPSNEWTGTFRDPRLSPPAI
GGGNPENSLTGQLFKVDDVGNNLQAINIPYDDANLRFWRNTSVANLQPGQTATLTKNYLG
YEWDEAVDNGFDPAGLVKLSSTTVPVGTYLLDYGNTTGNGISTHNLTLYRAPSGALVFGA
GTVYWTWGLSDNHDLQATPTDPRVQQAMVNLLADMGIQPGTLQSGLVASTGSTDNVAPTS
VISVPATVAVGTTVTISGTAADTGGGVIAGVEVSTDNGASWHPATGDENWTYSWSPQVAG
SYTIRSRAVDDSINLETPSAGRTVTVSAPSYTSLFGSATPAVVNTNDSSAVELGVKFQTS
VAGTVTGIRFYKGDQDTGTHTGSLWSSTGTRLATLTFTNETTSGWQTAYFTSPVSLTAGQ
TYTASYHTNSGRYSTTTNYFTSNVTSGPLTAPASGNGVYRYGNNSLFPTSTFQSTNYWVD
VMFTTSASNTPPTAVADAGDATEKGGVANGSGGAVASGNVLTNDTDPNAGDTKTVTAVVF
GATSGTLGSALNGTYGSLVLNASGAYSYTINESNAAVQALRQSTNTLSDVFSYTMRDSAG
ATATANLTITIHGANDAPVLAVQTAAQNATVGSAFSFTLPTTTFTDVDSGETLTYSATAA
DGTALPSWLSFNASTRTFSGTPTTSGTYGVRVTATDLGGLAANETFNIAVSTQGNTPPTA
VADAGDATEKGGVANGSGGAVASGNVLTNDTDPNAGDTKTVTAVVFGATSGTLGSALNGT
YGSLVLNASGAYSYTINESNAAVQALRQSTNTLSDVFSYTMRDSGGATATANLTITIHGA
NDAPVLAVQTATQNATVGSAFSFTLPTTTFTDVDSGETLTYSATAADGTALPSWLSFNAS
TRTFSGTPTTSGTYGVRVTATDLGGLSANETFNIAASAGATTYSLFSASSTPAQTNLNDG
QQLELGVKFTSNVAGDVTGIRFYRSANDNGQNVVDLWTSTGTKLATANFTNTTASGWQTV
NFATPVTITANTTYVASYHTTGAYVATNNFFTTAVTNGPLTAPSSAVAGGNGVYAYGGSA
TTGLFPNATFNSANYYADVIFRPQLAA
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
gtggattcgctgattccccggtggttggcggccggcgaaaaaggaaggccgcgcaagccg
gccgaaacgcacgcggatcgtgctcaacttgcgacctccgcgcaaactgccgatggaaaa
aagcatgatggcgtgcttgtcgacgatcccaacgaaatgccggcgctcgccgagcacgac
ggggaacatcggacgggcgtgatcgccgagccggacggtcagggcagtatcacccagcca
ctgccgcctttgctcgagcctttcgcggtagatcgcgagaccggagaccgggaaggtgac
acggttgcgtctcggttgtttgcccatgggccgggctttgcagggttcaacgagaacgcg
aacggatctcgatcgccacattatcgcagctaccctggaatgagcctcatcggcgacgat
cctctggcgccttatctgccgcagagccctgcggcgacggcctcggcgcacgattctgcc
tcgctggccggcgagcgtgcgccctcgggcaacgtcgtcattctagaatcgagcccgtca
gcgcaggcgagcgctcagcacgggggagcaaattcactggcgttcggcatgccctttggc
gtctgcgggtgcggctattttacgtccccgacgcggattctcgattgggcgcatggcggc
gcgatgctccaacaggacggccaactgcaggggaccaggctaaccgaagggccggacttt
gtgtcgacggccaagcgggccattgccgcctcgatcagcgacccgcttctcgatcgaaac
ctgtcgcccctctcgggttggcgcggaacggcaagttggacggaaacaacggccttgaac
ggatccttgccaggaggcggtgagaccggaacgggcaccaacacgaagggtgtcggcatc
ctttccggctctgtgacgacgccaccgacgacgcagcggtcgctgacgacccaaaaccag
gcagccgcggcggctgcggccagcaacgcgatcgtcctggaaaatcagaagccgggtaat
ccggaaagcgagtggggcatcgtcggtgccggtagctccaacatcgaagggtttgcgacc
gatatcagcgtcgacaacggcaagacgatcagcttcaagatcaacacgaattccaccaac
taccggatcgatatctaccggctcggctattatggcggcatgggggcccgcaaggtcgcg
accatgcagcacaccggtttgcagacccagcctaatccgttgcgcaatgccacgacgggc
accgtggacgcgggaaactgggctgtttcggcatcgtggaccgtacctgaggacgccgtt
tcgggcgtctatatcgccaagctcgtgcgtcaggatggcacctccggctcaaatcatatc
ccgttcatcgtgcgtgacgacagcagccaaagcgacatcgtcttccagaccgccgatcaa
acctggcacgcctacaacggttggggcggcgcaaacttctatggcggcaacgggccggcg
acggggcagggtgctggtcgcgcctatgcggtcagttacaacagaccgattgcgacccgc
ggcggggtcggcacttttgccggtccgcaggactatctgttcggcgccgaatatgcgggc
atctactggctggagcagaacggttatgacgtttcctacatggcgggggtcgacgccgac
cgctacggtagcctcttgctcaatcacaagacctatatcgatgccgggcacgacgaatac
tggtccggacagcaacgaaccaatgtcgaggccgcacgcgacgcgggcgtcaacctgcag
ttctggagcggcaatgaggtctattggcgcacccgctggggcaatgcctatagcgccgac
gcgacgccctatcgcacgttgatctcctacaaggagacatggtcgcccagcgccagcatc
gacccttccaacgaatggacaggcaccttccgcgatccgcgtctcagcccaccagcgatc
ggcggcggaaacccggaaaactcactgactgggcagttgttcaaggtcgacgatgtcggc
aacaatcttcaggcgatcaatattccctatgacgacgccaatctgcgtttctggcgcaat
acgagcgtcgccaaccttcaacccggccagacggcgacgctcaccaaaaactatcttggt
tacgagtgggacgaagcggtcgataacggcttcgatccagccggcctcgtgaagctgtca
tcgacgacggttccggtcggcacctatttgctcgattacggaaacacgaccggcaatggc
atctcgacccataatctgacgctctatcgcgctccgagcggcgcgctggtgttcggcgcc
ggcaccgtctactggacatggggcctgagcgacaatcacgacctccaggcgacgccgacg
gacccgcgcgtgcagcaggcaatggtcaatctgctcgccgatatgggcattcagccggga
acactgcaatccgggctcgtcgcctcaacaggttccacggataatgttgcgccgacctcc
gtcatttcggtgccggccacggtggccgttggaaccaccgtcacgatttcgggtaccgcg
gctgacacgggcggcggtgtcatcgccggtgtcgaggtttcgaccgacaacggggcgagc
tggcatccggcgacaggcgatgagaactggacttatagttggtcgccacaagttgcgggc
agctatacgatccggtcgcgggctgtcgacgacagcatcaatctcgaaacgccgtcggcg
ggacgcacggtcaccgtcagcgcgccgagttacacgtcgctcttcggttcggcgacgcca
gcggtcgtcaacaccaacgatagctcagccgtcgaactcggcgtcaaattccagacttcc
gtggcaggcaccgtcaccggcatccgcttctacaagggcgatcaagataccggcacgcat
actggttcattatggtcgagcaccggtacacggcttgcgaccctcaccttcacgaatgag
acgaccagcggctggcagactgcctatttcaccagtccggtgtcattgacggccggacaa
acctacactgcatcctaccacacgaatagcggccgttattcgacgaccaccaactacttt
acctcaaatgtgaccagcggtccgctgacggcgccagccagcggtaacggcgtctaccgc
tatggcaataacagcctgtttccaaccagcaccttccaatcgacaaactattgggtcgat
gtgatgtttacgacgtcggcctcgaacacgccgccgacggcagttgccgatgcgggtgat
gccaccgagaagggcggggtggccaatggttcgggcggcgcggttgccagcggcaatgtg
ctgaccaacgacaccgatccgaatgccggtgacaccaagaccgtcacggcggttgtcttc
ggtgcgacgtcgggcacgcttggctcggcgctgaacggcacttacggcagtctcgtgctg
aatgcatcaggcgcttacagctatacgatcaacgagagcaatgccgccgtccaggcgctg
cggcagtcgaccaacacgctgagcgatgtcttcagctatacgatgcgcgacagcgccggc
gccacggccacggcaaacctgaccatcaccatccatggcgccaatgatgcgccggtgctg
gccgtccagacggcggcccagaatgccaccgtcggctccgccttctccttcaccctgccg
acgacgaccttcaccgatgtcgacagcggcgagacgctgacctattcggcaaccgccgcc
gatggtacggcactgccgtcatggctgagcttcaacgcctcgacgcggaccttctccggc
acgccgacgacgtcaggcacctatggcgtcagggtgacggcgaccgatctcggcggcctt
gccgccaacgagaccttcaacatcgccgtgtcaacgcaaggcaacacgccgccgacggcg
gttgccgatgcaggtgatgcgaccgagaagggcggggtggccaatggttcgggaggcgcg
gttgccagcggcaatgtgctgaccaacgacaccgatccgaatgccggtgacaccaagacc
gtcacggcggttgtcttcggtgcgacgtcgggtacgctcggctcggcgctgaacggcact
tacggcagcctcgtgctcaatgcatcgggcgcttacagctatacgatcaacgagagcaat
gccgccgtccaggcgctgcggcagtcgaccaacacgctgagcgatgtcttcagctatacg
atgcgcgacagtggcggcgccacggccacggcaaacctgaccatcaccatccatggcgcc
aatgatgcgccggtgctggcggtgcagacagcgacccagaatgccacggtcggctccgcc
ttctccttcaccctgccgacgacgaccttcaccgatgtcgacagcggcgagacgctgacc
tattcggcaaccgccgccgatggtacggcgctgccgtcatggctgagcttcaacgcctcg
acgcggaccttctccggcacgccgacgacgtcaggcacctatggcgtcagggtgacggcg
accgatctcggcggcctctcggccaacgagaccttcaacatcgccgcatcggcaggggcg
acgacctacagcctgttctccgcctccagcacgccggcccagaccaacctcaacgatggt
cagcagctcgagctcggcgtcaagttcacgtcgaacgttgccggggatgtcaccggcatc
aggttctatcgcagcgccaacgacaacggtcagaacgtcgtcgacctctggacctccaca
ggcaccaaacttgcaaccgccaactttaccaacaccacagcaagcggctggcagacggtg
aacttcgcaacaccggtcaccatcaccgccaacacgacctatgtcgcctcctatcacacg
acaggcgcatacgtcgcgaccaacaatttctttacgactgccgtcaccaatggtccgctg
acggccccgtcaagtgcggtcgctggcggcaacggcgtctacgcttatggcgggtcggcg
accacggggctcttcccgaatgctaccttcaattcagccaattactatgccgatgtgatc
ttccgcccgcagcttgccgcatga
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