Reichenbachiella agarivorans: N6H18_03005
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Entry
N6H18_03005 CDS
T08483
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rek
Reichenbachiella agarivorans
Brite
KEGG Orthology (KO) [BR:
rek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rek03009
]
N6H18_03005 (rimO)
Enzymes [BR:
rek01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N6H18_03005 (rimO)
Ribosome biogenesis [BR:
rek03009
]
Prokaryotic type
ribosomal protein modification factors
N6H18_03005 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UXP32923
LinkDB
All DBs
Position
complement(740414..741736)
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AA seq
440 aa
AA seq
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MKTKGRRKEKVNIVTLGCAKNIVDSEVILTQLKGNDIDAVHESKKNDATTVIINTCGFIE
NAKQESIDTILNFVDAKNQGLIEKVYVTGCLSHRYKDDLRKEIPDVDDYFGTTSLKELLA
KFKADYKHELLGERISTSDTHYAHLKIAEGCDRPCSFCAIPLMRGKHISRPMEELVSEAQ
NLVRNGAKELLLIAQDSTYYGLDLYKKRNLAELMDKLSDVEGLDWMRLHYAFPTGFPMDV
LDVMKAKPNICNYLDIPLQHGSTKILKLMRRGTDREKTQILLDEIRNKIPDIAIRTTLIA
GHPGETEEDFEEMMRFVERSQFDRLGVFAYSHEEDTHSGTMNDDVPEEVKNERVDMLMEL
QEGISLSKNEKKIGKTFKTLIDRKDGEYFVGRTQYDSPEVDNEVLVLAEDNYLRIGDFVD
VEITDAEPFDLYGRPLFKKG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaagacaaaaggcagaagaaaggaaaaagtgaatattgtgacgttggggtgcgctaaa
aatatagtggattcggaggtcatattgacacaactcaaaggcaacgatatcgatgcggtg
catgagtccaaaaagaacgatgcgacgactgtcatcatcaatacttgtggttttatcgaa
aatgccaaacaagaatcgatcgatacaatcttgaatttcgtggatgccaaaaatcaaggc
ttgatcgaaaaagtctacgtcacaggttgtctttctcacagatacaaagatgatttgcgc
aaggaaatcccagacgtagatgattatttcggcacgacgagtttgaaggaactgttggcg
aagtttaaggcagactacaagcacgaattgctgggagagcgaatttcgacttctgatacc
cactatgctcacctcaagattgcagagggttgtgacagaccctgttcgttttgtgcgatt
cctttgatgagaggaaaacacatctccagacctatggaagagcttgtatccgaagcacag
aatttggtaagaaacggtgcaaaagaactactactcatcgctcaggattctacctactac
ggattggatctttacaagaaaagaaacctcgcagaactgatggacaagctttctgatgtg
gaagggttggattggatgaggttgcactatgcattcccgacgggattcccaatggatgta
ctagatgtgatgaaggccaagcctaatatctgtaactacctagacatcccgctccagcat
ggatcgaccaagatcctgaaactgatgcgcagaggtaccgacagagaaaaaacacaaata
ctgctggacgaaatccgaaacaaaattccagacatagctattcgtacaactttgatcgcg
ggtcatcctggagagactgaggaggattttgaggagatgatgaggttcgtagaaagaagt
cagtttgaccgattgggtgtgtttgcctactcgcatgaggaagacacccactcaggcacg
atgaatgatgatgtgccagaggaagtcaaaaacgaacgtgtggacatgctgatggaactt
caagaaggcatctctctctccaagaacgagaagaaaattggaaagaccttcaagacactg
atcgatcgcaaggacggagagtatttcgtcggacgtacccaatacgactcaccagaggtg
gacaatgaagtcttggtcctggcagaggacaattatctcagaatcggtgatttcgtagat
gtggagatcacagatgcagagccatttgatctatacggcagacctttgtttaagaagggg
tga
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