Reichenbachiella agarivorans: N6H18_04485
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Entry
N6H18_04485 CDS
T08483
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rek
Reichenbachiella agarivorans
Pathway
rek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6H18_04485 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rek03019
]
N6H18_04485 (recQ)
03400 DNA repair and recombination proteins [BR:
rek03400
]
N6H18_04485 (recQ)
Enzymes [BR:
rek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N6H18_04485 (recQ)
Messenger RNA biogenesis [BR:
rek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N6H18_04485 (recQ)
DNA repair and recombination proteins [BR:
rek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N6H18_04485 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Mt_ATP-synt_D
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UXP33209
UniProt:
A0ABY6CTL4
LinkDB
All DBs
Position
1056883..1059066
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AA seq
727 aa
AA seq
DB search
MVVIQEEELREQLKNTFGFSKFRGNQAAIIKNIMSGKNTFVLMPTGAGKSLCYQLPAVMQ
EGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSSLNKTEIKRVKQETLAGQVKLLYVAPE
SLTKEENVEFLSEANISFVAIDEAHCISEWGHDFRPEYRRIKSIVEQLGSIPIIALTATA
TPKVQLDIQKNLQMEDADVFKSSFNRKNLYYEIRPKVDVKKQLIRFVKEHKGKSGVIYCL
SRKKVEEIAELLKVNDINAAPYHAGLDSSVRMKNQDSFLNEDVDVIVATIAFGMGIDKPD
VRFVIHYDTPKSLEGYYQETGRAGRDGLEGKCVMFYSLDDIIKLEKFNKDKPVTERENSK
LLLEEMSSYAESSVCRRRQLLHYFGEEYTDTDCSTDGMCDNCAHPKEIFQGQEFIQKAIN
IAIKTEQRFGIKHLVDVARGIENQYVKSYDHNKLDVFGIGSSDTEVFWRSIVRQTLLNEF
LEKDIENIGVLKVTQKGHDYLQSPYPIELSKDHDYMVEELDKNETNNIKAHDEELFELLK
NLRKKVAKEKNLPPYVIFQDPSLEEMATTYPTNNEDLAQINGVGVGKVAKFGKPFVDLIS
KYVKENDLTTASDVVIKSAINKSKIKIFLIQQIDRKVDLEEIAEIKNMTFDAVIAEIENI
CYSGTKLNLDYYIDSFIDEDRQDDLLDYFLTAETDDIEVAMEELEYDGYSEEEVRLMRIK
FMSEYAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggttgttattcaggaggaagaacttcgtgagcaactgaaaaacacttttggtttcagt
aagttcagaggaaatcaggcagctatcatcaagaacatcatgtcaggcaaaaacactttt
gtgttgatgccaacaggcgcaggcaaatcgctgtgctatcagctacctgctgtcatgcaa
gagggcacggccatcgtaatctctccgctgattgcgctgatgaagaaccaagttgatcag
ttgaatgcttttggtgtcaatgcacaatttttaaattcctctctcaacaagaccgagatc
aaaagagtcaaacaggaaaccttggcgggtcaagtcaagttgctctatgtcgctccagag
tctctcaccaaggaggaaaatgtggagtttctaagtgaagccaacatctcttttgtagcc
attgatgaggcgcattgtatctccgaatgggggcatgactttcgtccagaataccgcaga
atcaaatctattgtagagcagctcggttctattcccatcatagcactgactgctactgct
acgcctaaagtccaactcgacatccagaaaaatctccaaatggaagatgcggatgtattc
aaatcttctttcaaccgaaaaaatctctactacgagatcagaccaaaagttgatgtaaaa
aaacaacttattcgattcgtcaaagaacacaaaggcaagtctggtgtcatctactgtctc
agcagaaaaaaggtagaagaaatagccgaattgctcaaagtcaatgatatcaatgccgcc
ccctatcatgcaggactagactcgtctgtaagaatgaaaaaccaagacagcttcctcaac
gaagacgtcgatgtgattgtagccaccattgcctttggaatggggattgacaagcctgat
gtgcgatttgtcatccactatgacacaccaaaatctctcgaaggatactaccaagaaact
ggcagagcgggcagagatggattggaagggaaatgtgtaatgttctatagtttggacgac
attatcaaacttgagaaattcaacaaagacaaaccagtcacagaaagagagaactccaag
ctcctcttggaagaaatgtcgtcctacgctgaatcttcggtatgtagaagacgccaattg
ttgcattacttcggcgaagaatacacagatacagactgctcaaccgacggcatgtgtgac
aactgcgctcatcccaaagaaatattccaaggacaagaattcattcaaaaggccatcaat
atagcaatcaaaacagaacaaagatttggcatcaaacatctcgtagatgtagcacgtggg
atcgaaaaccaatatgtcaaaagctatgatcacaacaagttagatgtatttggaattggt
agtagcgacacagaggtattttggagatctatcgtacgacagactctactcaatgaattt
ttggaaaaggacatagagaatatcggtgtgttgaaagtgacccaaaaaggtcatgattac
ctccaatcaccctatccaatcgaactctccaaagaccatgactatatggtggaagaactc
gacaagaatgaaaccaataatatcaaagcccatgacgaggaactcttcgaactactcaag
aatctaagaaagaaggttgccaaagaaaagaatttacctccctacgtcatatttcaagac
ccctcgttggaagagatggccactacctaccctaccaataatgaggatcttgctcagatc
aacggcgtaggagtaggcaaagtagccaaatttggaaaaccattcgtggacctgatcagc
aagtacgtgaaggaaaacgacttgaccactgcctcagatgtagtcatcaagtccgctatc
aacaagtcaaagattaaaatattcttgatccagcagattgaccgcaaggtagacctagag
gaaattgctgaaattaaaaacatgacctttgatgccgtaatagccgaaatagaaaacatt
tgctattcagggacaaaactaaacttagattattacatcgattctttcattgacgaagac
aggcaagatgaccttctggactacttcctcacagccgaaacggatgatatagaagtcgcc
atggaagaactagaatacgatggatattctgaagaagaagtacgattgatgagaatcaaa
tttatgtctgagtacgccaattaa
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