KEGG   Reichenbachiella agarivorans: N6H18_05445
Entry
N6H18_05445       CDS       T08483                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
rek  Reichenbachiella agarivorans
Pathway
rek03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rek00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N6H18_05445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rek03019]
    N6H18_05445
Enzymes [BR:rek01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     N6H18_05445
Messenger RNA biogenesis [BR:rek03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     N6H18_05445
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase P-loop_SecA CMS1 AAA_22
Other DBs
NCBI-ProteinID: UXP33395
LinkDB
Position
1292079..1293365
AA seq 428 aa
MTFESLGLSDKILEAVTKKGYTTPSPIQEKAIPVILERKDVLASAQTGTGKTAGFTLPLL
QILNQGQTLRNRPVRALILTPTRELAAQVYENVREYSQFTDLKSTVIFGGVNAGPQIKDL
KRGVDILVATPGRLLDLINQKVMTLDKVEIMVLDEADRMLDMGFSRDINRIIQLLPTRRQ
NLLFSATFSKEIKKLANGLLNHPVTVEATPENTTAEKVFQRAFRVDQKQKPYLTIQLIEE
GDWSQVLIFTRTKHKANKLSEQLEKKGITSAAIHGNKSQAARTKALDGFKKGKIRVLVAT
DIAARGLDIPLLPHVINFELPNVPEDYVHRIGRTGRAGAKGEAISLVSVDEIEYQQGIEK
LLGQKLRTEVMKGFEPTETEPTKSESKSKSKGGFRHSSHGGSNGAKQGGGNSSNSSKKPF
RRRRTSNY
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgacattcgaatcactaggcctatctgataagatattagaggccgttacaaaaaagggt
tatacaaccccatctcctattcaggaaaaagcaattccagtaatattagaaagaaaagac
gtactagcctccgcgcagacaggtacaggaaaaacagcaggctttactttgcctttgctt
caaatcctaaaccaaggtcaaacactgagaaacagacccgtccgagcattgatactcaca
ccaaccagagagttggccgctcaagtatatgaaaacgtaagagaatacagccagtttacc
gacttgaaatctacggtgatttttggtggtgtaaatgccggtcctcaaatcaaagatttg
aaacgtggtgtggatatcctggtagccactccaggtagattgctagatctcatcaatcaa
aaggtcatgaccctcgacaaagtagagatcatggttcttgatgaagcagatcgtatgctt
gacatgggtttctctagagacataaacagaatcatccagctgctcccaacacgcagacaa
aacttgctgttctcagctacgttctccaaggaaatcaaaaaattggccaatggcctgttg
aatcatcctgtcacggtggaagcaactcccgaaaataccactgcagaaaaagtatttcaa
agagcgttcagagttgatcaaaaacaaaaaccctatttgaccatccaattgatcgaagag
ggtgattggagtcaagtcttgatttttaccagaaccaaacacaaggctaacaagctaagt
gagcaattggagaaaaagggtattacctctgcggcgattcatggcaacaagagtcaagct
gcgagaaccaaagcattggatggtttcaaaaaaggaaaaatcagagttttggttgcgact
gacattgctgcacgtgggttggatattccattgctacctcatgtaattaactttgagttg
cccaacgtgccagaagattatgtacacagaatcggcagaacgggtcgtgcaggtgccaaa
ggcgaagcaatctctctggtcagtgtggatgaaatcgaataccaacaaggcatcgaaaaa
ctcctcggacaaaaattgcgcacagaggtcatgaaaggatttgagcccacggaaactgag
cccaccaaaagcgaaagcaaatctaaatcaaaaggtggttttcgccactcaagccacggc
ggaagcaatggtgccaaacaaggcggaggaaatagcagcaacagcagtaaaaaaccattc
agaagacgaagaaccagcaattattaa

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