Reichenbachiella agarivorans: N6H18_11745
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Entry
N6H18_11745 CDS
T08483
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rek
Reichenbachiella agarivorans
Pathway
rek03030
DNA replication
rek03430
Mismatch repair
rek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N6H18_11745 (dnaE)
03430 Mismatch repair
N6H18_11745 (dnaE)
03440 Homologous recombination
N6H18_11745 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rek03032
]
N6H18_11745 (dnaE)
03400 DNA repair and recombination proteins [BR:
rek03400
]
N6H18_11745 (dnaE)
Enzymes [BR:
rek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N6H18_11745 (dnaE)
DNA replication proteins [BR:
rek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N6H18_11745 (dnaE)
DNA repair and recombination proteins [BR:
rek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N6H18_11745 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF5514
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UXP31022
LinkDB
All DBs
Position
complement(2800751..2805028)
Genome browser
AA seq
1425 aa
AA seq
DB search
MYLIFDTETTGLPKNYNAPLEDLDNWPRLVQLAWQLHASDGSLIRAQNFIVKPDGYTIPF
NAQKVHGISTERAEAEGHDLNEVLDIFSADLLKTQSVVGHNVEFDLNIVGAEYLRKERNN
DLSTIKAIDTKDESTDYVAIPGRGGKFKWPTLTELHTKLFGTGFADAHDAAYDVDATAKC
FFGLITEGIIPPLDGRDRKEVIYEAPKLDAANFAVAEEVTVETPPKGTTADIKAMEDVSF
SHLHVHSQFSVLQAVSEVQSIVDTAKAMDMPAIALTDHGNMMAAFHFVRAAHKAEIKPIL
GCEFNITDDRKSKSKQNNGYQQVLIAKNKAGYHNLAKMASIAFIEGFYYVPRIDKEVLVQ
YKSDIIATTGGLWGEIPFTILNYGVEQAEEVFIWYKEQFGEDFYVELTRHGVEEENIVNQ
VLLDFAKKHGVKYFASNNTYYTEKKQANAHDILLCVKDGEQQSKPKMYIGKRGREYRYGF
PNDEFYIKSQDEMKKLFADLPEAISTTAEIVEKIESYALERDILLPAYSIPEEFRDERDK
DDPKLKLGENNLLRHLTYEGAKKRYPEITPEIEERLDFELEVIRNTGYPGYFLIVQDFCQ
AARDMGVSVGPGRGSAAGSAVAYCTGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDE
GRQRVIDYVINKYGANQVAQIITYGTMAAKSAIRDTARVLELNLSEADKLAKLVPDIKLK
KLFGFSDKELADALKNNAEAITQANELKRILGIGDSSDESKVLNQARVLEGSVRNTGIHA
CGVIITPDDITKFVPVALAKDSDMYCTQFDNSVVEDAGLLKMDFLGLKTLTLIKDACRLV
KQRHGLDLDPDNFPIDDQKTYELFQRGETVGIFQYESPGMQKYMRELKPTVFADLIAMNA
LYRPGPIEYIPSFIKRKHGDEEIQYDLADMQEYLEETYGITVYQEQVMRLSQKLADFTKG
EADVLRKAMGKKQMAVLDKMKPKFIEQASAKGHDAKILEKVWKDWEAFASYAFNKSHSTC
YAWVAYQTAYLKANYPAEYMAAVLSNNMNDIKQVSFFMEECQRMGLDVLGPDVNESIMKF
NVNEQGQVRFGLAAMKGAGDAAVKALIEEREANGPYSDIFNLATRVNLRQVNKKTFEVMA
QAGAFDCFKDYHRRQYLATDDGEANLIEKVIKYANRMEAQASSAQASLFGGDTGVSEPIP
TVGNVERFSDLEQLRLEKEVVGLYISGHPLDQFRFEIDNFCNTGLGELNNLAELQKKGPN
IRLAGMVTAIAHRQTKNGKPFGTLEIQDYSDTYTFFLFSDDYIKFKEFFEVGWFLYIQGA
VKMKWQGPDMEFKINTISLLTDIREEKTKGITLNVRLQDISETFIQDIYALTTAHGGEGI
LKVNIIDPEDNLKVNLMSRTIKISTDDELLKKLEKYDAIHYDVIV
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgatatttgataccgagaccactggtttacccaagaattacaatgctcctttg
gaggatttggacaactggcctagactggtgcaactcgcttggcaactccatgccagtgac
ggttctctcatcagagcgcaaaacttcatcgtcaaaccagatggctataccatccctttc
aatgcgcagaaagtccatggtatctcaacagagcgtgcagaagcagaaggtcacgatctc
aacgaagtactggatatattctcagcagatctgctcaaaacccaatctgtcgtaggtcac
aacgtagagtttgacctcaacatcgtcggggcagagtacctgagaaaagaaagaaacaac
gacctctctacaatcaaagccatagacaccaaggatgaatccacagactatgtggctatc
ccaggtcgtggtggcaagttcaaatggccgacactgacagaactacacaccaagctattc
gggacgggctttgcagatgctcacgatgcagcatacgatgtagacgctactgccaaatgt
ttctttggtttgatcacagaggggatcatcccaccactggatggtagagacagaaaggaa
gttatctatgaagctcccaaattagatgctgccaactttgctgtggcagaagaagtgaca
gtagagactcctcccaaaggcacaacagctgatatcaaagccatggaagatgtcagcttc
tcccatctacatgtacactcgcagttctcagtactgcaggcggtatcagaggtgcaatcc
attgtggacactgccaaggccatggatatgcccgcgattgcgctgacggatcatggcaac
atgatggcagcctttcatttcgtacgagccgctcacaaagctgagatcaaacctatccta
ggctgtgaattcaacattacagacgaccgaaaatcaaaaagcaagcaaaacaacggctac
cagcaagtactgatcgccaagaacaaagctggctatcacaacttagcaaaaatggcttcc
attgccttcatcgaaggtttttactatgtacctaggattgacaaagaagtattggttcag
tacaagagtgacatcattgctaccacgggtggactttggggagagattccttttaccatc
ctcaactatggcgtagaacaagccgaagaggttttcatctggtacaaagagcaattcggt
gaggatttttatgtcgaactcacacgtcacggtgtagaagaagaaaacattgtgaatcag
gttttgctggactttgccaagaagcatggagtaaaatattttgcctccaacaacacctac
tacacagaaaagaagcaagccaatgctcacgacattctgctctgtgtaaaggacggagag
caacagagcaagcccaaaatgtacataggcaagcgtggcagagaataccgctatggcttc
cccaatgacgagttttacatcaagtcccaagacgaaatgaaaaaactctttgcggatctg
cctgaggccatcagtaccacagcagagatcgtagaaaaaatcgaaagctatgcactcgaa
cgagacatcctcctccctgcctatagcatcccagaggagtttcgagacgaaagagacaaa
gacgaccctaaactcaaactaggagaaaacaacctgctgcgccacctcacctacgaagga
gccaaaaaacgatatccagaaatcactcctgagatcgaagagcgattggattttgagcta
gaagtcatccgaaacactggctacccagggtacttcctgattgtacaggatttttgtcag
gcagccagagacatgggcgtctctgtaggtccaggtcgtggatcagctgctggatcagct
gttgcctattgtacggggatcaccaatgtagacccgatcaagtatgacctactttttgag
cgtttcttgaatccagaaagggtgtccatgcccgatattgatattgactttgatgacgag
ggtcgtcagcgggtcatcgactatgtaatcaacaaatacggagcgaatcaggtagctcaa
atcatcacctacggtacgatggctgccaagtctgccatccgagacacagctcgggtacta
gaactaaacctctccgaagcagacaaactcgccaaactcgtccctgatatcaaacttaaa
aagctctttggttttagtgacaaagaactggcagatgcactcaaaaacaacgcagaagcc
atcacccaagccaacgaactcaagagaatcttaggcataggtgacagtagcgacgagtcc
aaagttttgaaccaagccagagtcttggaaggctctgtccgaaacacgggcattcacgcc
tgtggagtcatcatcacgcctgacgacatcaccaagttcgtcccagtggcacttgccaaa
gactctgacatgtactgtacccagtttgacaactcggtcgtagaagatgctggcttgctc
aaaatggattttttgggtctaaaaactctgacactgatcaaagatgcttgtcgtctggtc
aaacaaagacatggtttggatctcgatccagacaacttccctattgatgatcaaaagacc
tatgaactcttccagcgcggtgaaacggtagggatattccaatacgaatctcctggtatg
cagaaatacatgcgggaactgaaacccaccgtatttgctgatttgattgccatgaatgca
ctctatcgtccgggacctatcgagtacatcccttcatttatcaagcgtaagcatggagat
gaggagattcagtacgatttggcagacatgcaagagtacctagaggagacttacggtatc
acggtctatcaggagcaggtcatgcgtttgtctcagaagctcgcggacttcaccaaaggt
gaggccgatgtacttcgtaaggcgatgggtaagaagcaaatggcggttttggacaaaatg
aagccaaagttcattgagcaggcctctgccaaaggacatgatgccaagatactggagaaa
gtatggaaagattgggaagcctttgcatcctatgccttcaacaaatcacactcgacctgt
tacgcttgggtggcataccaaactgcctacctcaaggccaactatcctgccgaatacatg
gcggccgtactgagcaacaacatgaacgacatcaagcaggtcagtttcttcatggaagag
tgccagcgcatgggactcgacgtattgggtcctgatgtgaacgaatccatcatgaaattc
aatgtcaacgaacaaggacaggtacgatttggactcgcagcaatgaagggtgcaggtgat
gctgctgtcaaagcgctgatcgaagagcgtgaagccaatggcccctactccgacatcttc
aatctagcgacccgtgtcaacctgagacaagtcaacaaaaagaccttcgaagtgatggca
caggcaggtgcttttgactgcttcaaagactaccacaggagacaatacctcgctaccgat
gatggagaagccaacctcatcgaaaaagtcatcaaatacgccaaccgtatggaggcacag
gcatctagtgcacaggcctcactcttcggtggtgatactggtgtatctgagccgatccct
acggtgggcaatgtcgagcgatttagcgatctagagcaactccgattggaaaaagaggtc
gtgggactctatatctcaggtcatcctttggatcagttcaggtttgaaatcgacaacttc
tgtaacactggattaggcgaactcaacaatctcgctgaactgcaaaaaaaaggtcccaat
atccgtcttgcaggtatggtgaccgccatcgctcacagacaaaccaagaacggaaagccc
tttggaacactggagattcaagattattcggatacctacacttttttcttgttctccgat
gactatatcaaattcaaagaattttttgaagtaggttggttcctctacatccagggagct
gtcaaaatgaagtggcaggggccagacatggagtttaaaatcaacacgatatctctactg
actgatatcagggaggaaaaaaccaaaggcatcacgctcaatgtcagactacaggatatc
tcagagacttttattcaggacatctatgccctcaccactgcacacggtggggaaggaatc
ctcaaagtcaacatcatagatcctgaagacaacctcaaggtcaacctaatgtctcgcacc
atcaaaatcagtaccgatgacgaactcttgaaaaagctagaaaaatatgatgccatccac
tatgatgtgatcgtgtga
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integrated database retrieval system
