Reichenbachiella agarivorans: N6H18_12020
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Entry
N6H18_12020 CDS
T08483
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rek
Reichenbachiella agarivorans
Pathway
rek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6H18_12020 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rek03019
]
N6H18_12020 (pnp)
03016 Transfer RNA biogenesis [BR:
rek03016
]
N6H18_12020 (pnp)
Enzymes [BR:
rek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
N6H18_12020 (pnp)
Messenger RNA biogenesis [BR:
rek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N6H18_12020 (pnp)
Transfer RNA biogenesis [BR:
rek03016
]
Prokaryotic type
tRNA degradation factors
N6H18_12020 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
UXP31077
UniProt:
A0ABY6CKR7
LinkDB
All DBs
Position
2862453..2864594
Genome browser
AA seq
713 aa
AA seq
DB search
MSLNVVSKSVKLSDGREITIETGKLAKQADGSVVLKMGNTMLLATIVSATDAKEDVDFLP
LSVDYQEKFASAGKIPGGFLKREGRLSDQEVLISRLVDRALRPLFPEDYHADTQVFIQLI
SLGDDDLPDALAAFAASAALAVSDIPFNGPISEVRVIYKEGQYLINPTKTQLVGADLDMI
IAGTSTDIMMVEGELQEVSEEVMIGAIKAAHTAIIEQCALQVELAAAVGSTVKREYSHED
HDEALAADIKAKTYDQVYAVAKEGLADKNLRKQKFGAIYDAYVETLPELPEGEVYSKFLL
KKYYHDVEKEAIRNCVLDTRVRLDGRQLDEIRPIWSEVDYLPSAHGSAIFTRGETQSLTS
VTLGTKMDQQMIDGAVHSGYSKFILHYNFPGFSTGEVRPNRGPGRREVGHGNLAWRALKP
MLPPDEDNPYTIRVVSDILESNGSSSMATVCAGSLALMDAGVSLKRPVSGIAMGMISDPV
TGKYAVLSDILGDEDHLGDMDFKVTGTDQGITACQMDIKVDGLSYEVLTEALMQAKAGRE
HILNKIKETLSETRADLKSHAPRSTTLRIPKELIGAVIGPGGKIIQEIQKESGATISIEE
DDRNGIVTIFATDGGAMAEALRRVNNITAMPEEGEVYVGKVKSIQPFGAFVEFMPGKDGL
LHISEIKWERVEKMDGVLEVGEEVKVKLIEIDKKTGKYRLSRKAIIPKPEKQA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaaacgtagtaagtaaatccgtcaaactaagtgatggaagagagattactatt
gaaaccggtaaattggccaagcaggcagacggatcagtagtattgaaaatgggcaacacc
atgttgctagcaacgattgtatctgcaacagatgcaaaggaagatgtagatttcttgcct
ctttctgtagactaccaagagaaattcgcttcagcaggtaagattcctggtggctttttg
aaaagagaaggcagactttcggatcaggaagtactgatttctagattagtagatagagct
ttgagacctttgtttccagaggattatcacgcagacacacaggtattcattcagttgatt
tctttgggtgacgatgatttgccagatgcattggcagcatttgctgcttctgctgcattg
gcagtgtctgatattccattcaatggacctatctcagaggtaagagttatctataaggaa
ggtcaatatttgatcaatcctaccaagacacaattggtaggtgcagatttggatatgatt
attgctggtacatctactgacatcatgatggtagagggtgagcttcaagaagtgtccgaa
gaagtaatgatcggagcgatcaaagcggcacacactgctatcattgagcaatgtgcgcta
caagtagagttggctgctgctgtagggtcaactgtaaaaagagaatactctcatgaagat
catgacgaggcattggctgctgatatcaaagcaaaaacttatgatcaagtttatgcggtt
gccaaagaaggtcttgctgacaagaacctaagaaaacaaaaatttggagcgatctacgat
gcttatgtagagacacttcctgaattgccagaaggtgaagtttacagcaaattcttgttg
aaaaaatattaccacgatgtggagaaggaagccatcagaaactgtgtcttggatacaaga
gtaagattggatggacgtcaattggacgaaatcagacctatatggagtgaagtagattac
ttgccatcagctcacggttctgcaatctttacaagaggagaaactcagtcattgacatct
gtgactttgggtaccaagatggatcagcaaatgatcgatggtgctgtacactcaggatat
agcaagtttatcttgcactacaactttccaggtttttcgactggtgaagtaagaccaaac
agaggcccaggacgtagagaagtaggacatggcaacttggcatggagagcgttgaaaccg
atgcttcctcctgatgaggataacccctatacaatcagagtggtttctgacatcttggag
tcaaacggatcatcatctatggcgactgtttgtgctggctcgctggcattgatggatgca
ggtgtgtcgttgaagagacctgtgtcaggtatcgcaatgggtatgatttctgacccagtg
actggcaagtatgcagttctttctgatattctgggagatgaagatcacctaggtgatatg
gactttaaagtgacgggtactgaccaaggtattactgcttgtcagatggatatcaaagtt
gatggtttgtcatacgaagtattgacggaagcattgatgcaagcaaaagcaggtcgcgag
catattttgaacaagatcaaagaaactctgtctgagacaagagcggacttgaaatctcat
gcaccgagatctactaccctcagaatacctaaggagttgattggagcggtaatcggacca
ggtggtaagatcatccaagagattcaaaaggaatcaggagctacgatatctatagaagaa
gacgatcgcaacggtatcgtgacgattttcgcgacagatggtggtgcgatggcagaagca
ctcagaagagtcaacaacatcactgctatgcctgaggaaggtgaagtatatgtgggtaaa
gtgaaatctatccagccatttggggcattcgtagagttcatgccgggcaaagatggattg
cttcacatctctgaaatcaagtgggaaagagttgagaaaatggacggagtacttgaagta
ggtgaagaggtgaaggttaaattgatagaaatagacaagaaaactggtaaatacagattg
tctagaaaagcaattattcctaagcctgaaaaacaagcttaa
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