Rhizobium etli bv. mimosae Mim1: REMIM1_CH00098
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Entry
REMIM1_CH00098 CDS
T02778
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rel03016
]
REMIM1_CH00098
Enzymes [BR:
rel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
REMIM1_CH00098
Transfer RNA biogenesis [BR:
rel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
REMIM1_CH00098
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGS19976
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All DBs
Position
105287..105913
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AA seq
208 aa
AA seq
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MAATIRYHEGDISAADAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QKAAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTTNPVFCTKIASRLCRTYTDRHGL
KDNLKEMLDVDVSKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTARLIRDGRFDH
ATACFAFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgttatcacgaaggcgatatttccgcggccgacgcggcccgctac
accggcgcgatcgcgatcgataccgagacgctgggcctggtgccgcggcgggatcgtctc
tgcgtcgtccagctttctccgggtgacggcaccgccgacatcatccgcatcgccgccggc
cagaaagcggcccccaatctcgtcgcccttctcgaagatcccacgcaccagaagatcttt
cattacggccgcttcgatattgccgtgctctttcataccttcggcgtcacgaccaatccg
gtgttctgcaccaagattgcttcgcgcctctgccgcacctacaccgatcgccacggcctc
aaagacaatctcaaggagatgcttgacgtcgatgtctccaaggcgcagcaatcttccgat
tgggcggctgagacgctgtcgccggcccagctcgaatatgccgcttccgacgtgctttat
ctgcacgcgcttcgcgataagctgacggcccgcctgatccgcgacggccggttcgaccac
gccacggcctgcttcgcattcctgccgacccgcgccaagctcgaccttctcggctgggaa
gaggccgatatcttcgctcacagctga
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