Rhizobium etli bv. mimosae Mim1: REMIM1_CH00159
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Entry
REMIM1_CH00159 CDS
T02778
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03030
DNA replication
rel03410
Base excision repair
rel03420
Nucleotide excision repair
rel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
REMIM1_CH00159 (polA)
03410 Base excision repair
REMIM1_CH00159 (polA)
03420 Nucleotide excision repair
REMIM1_CH00159 (polA)
03440 Homologous recombination
REMIM1_CH00159 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rel03032
]
REMIM1_CH00159 (polA)
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_CH00159 (polA)
Enzymes [BR:
rel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
REMIM1_CH00159 (polA)
DNA replication proteins [BR:
rel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
REMIM1_CH00159 (polA)
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
REMIM1_CH00159 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
REMIM1_CH00159 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AGS20031
LinkDB
All DBs
Position
163954..166953
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAAGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVVEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANV
EMAKLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTSLTRRVAEVCDCDAS
VIEPAVVPIEWGAAAHGPDLDAAEPEPVAGGIPDVSGESVPVPSRAKAKPGVEGAFSPAD
LAKARAEAFATLPFDHSTYETIRDLATLDRWIAAARDTGLIAFDTETTSLDAMQAELVGF
AMAIADNVADPTGTKIRAAYVPLAHKDGVGDLLGGGLAENQIPMRDALPRLKALLEDESV
LKVAQNLKYDYLLMKRYGVETKSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANITFDMVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQGAARLEDEIYTLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPETRRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKMEPALAEAGLAERVRMLLQVHDELIFEVEDEDV
EKAMPIIVSVMENATMPALEMRVPLKVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttccggcttcatctttcgggcgttt
cacgcactgccgccgctgacgcgcaaatcggacggcctgccggtcggcgccgtttccggt
ttctgcaacatgctgtggaagctcttgcgggatgcgcgcaacaccgatgtcggggtaaca
ccgacccatctcgccgtgattttcgattattccgcaaagacctttcgcaaggatctctac
gacgcctataaggcgaatcgttcggccccgcccgaagagctcattccccaattcggcctc
atcagagaggcgacccgcgccttcaacctgccctgcatcgagaccgaaggcttcgaggct
gacgacatcatagccacctatgcccgccaggccgaggcggcaggtgccgacgtcaccatc
gtctcctccgacaaggatctgatgcagctcgtcactcccaatgtccacatgtacgacagc
atgaaggacaaacagatcggcattcccgatgtcgtcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattccgtcgacaacgttccaggcattccc
ggcatcggccctaaaaccgccgcccagctgcttgaggaatacggcgacctcgacacgctg
ctcgaacgcgccaccgagatcaagcaggtcaagcgtcgcgagacgatccttgccaatgtc
gaaatggccaagctctcgcgcgacctcgtccgcctgcgcaccgacgtgccgctcgatctc
gatctcgacgcgctggtgctggaaccgcagaacggcccaaagctgatcggtttcctcaag
acgatggaattcacctcgttgacgcgccgcgtcgccgaagtctgcgattgcgatgcgagc
gtcatcgaaccggcggtcgttcccatcgaatggggcgcggctgcccatggtccggatctc
gatgccgccgagccggagccggttgccggcggcatccccgacgtttcgggcgaatcggtg
cccgtgccgtcgcgtgcaaaggcgaagcccggcgtcgaaggcgctttttcgcccgccgat
cttgccaaggcgcgggccgaggcttttgcgacgctgcccttcgatcactcgacctatgaa
acgatccgcgatctggcgacgctcgaccgatggattgccgctgcgcgcgacacagggctc
atcgctttcgatacggagaccacgtcactggatgcgatgcaggccgagcttgtcggcttt
gcgatggcgatcgccgacaatgtcgccgatcccaccggcaccaagatccgtgccgcctat
gtgccgctcgcccataaggacggcgttggcgatctgctcggcggcggccttgccgaaaac
cagatccccatgcgcgatgccttgccgcggctgaaggcattgctggaggacgaatcggtt
ctcaaggtcgcccagaacctgaaatacgactacctcctgatgaagcgctacggcgtcgag
acgaagagcttcgacgacacgatgctgatctcctatgtcctcgacgccggcaccggcgcc
catggcatggacccgctctcggaaaaattcctcggccatacgccgatcccctacaaggat
gtcgctggcagcggcaaagcgaacatcaccttcgatatggtcgacatcgatcgcgccacc
cattatgccgccgaagatgccgatgtgacgctgcgcctctggctcgtcctgaagccgcgg
ctggcggcggcagggctgaccagcgtctatgagcggctggagcggccgctgctgccggtg
ctggcgcgcatggaagcgcgcggcatcaccgtcgatcggcagatcctgtcgcgcctgtcc
ggtgaactggcccagggtgcggcgcgcctggaagacgagatctacacgctggctggcgaa
cggttcaacatcggctcaccgaagcagctcggcgatatcctgttcggcaaaatgggcctt
gccggtggcagcaagacgaaaaccggacaatggtcgacctccgcctccgtgcttgaggat
ctcgccgccgccggcttcgagctgccccgcaagattgtcgactggcgccagctcaccaag
ctgaaatccacctataccgacgcgcttccgggctatgtccatccggaaaccaggcgggtc
cacacctcctattcgctggcttcgacgaccacggggcgcctgtcctcgtccgaaccgaac
ctgcagaacattccggtgcgcaccgcagaaggccgcaagatccgcaccgccttcatctcg
acgccgggtcacaagctgatctctgccgactacagtcagatcgaattgcgggtgcttgcc
catgtggccgagatcccgcagctgaccaaagccttcgaggatggcgtcgacattcacgcc
atgaccgcgtcggaaatgttcggcgtgccggtcgaaggcatgccgggtgaagttcgccgc
cgcgccaaggcaatcaatttcggcatcatctacggcatctccgctttcggtctcgccaac
cagctttcgatcgagcgctcggaagccggcgactacatcaagaaatatttcgagcgcttc
cccgggatccgcgactatatggaaagccgcaaggcgatggcccgcgacaagggttatgtc
gaaacgatcttcggccgccgcatcaactatccggaaatccgctcttccaacccttcggtg
cgcgccttcaacgaacgggcggcgatcaacgcgccgatccagggttccgcggccgacgtc
atccgccgggcgatgatcaagatggagcccgcgctcgccgaagcaggtcttgccgagcgt
gtgcgcatgctgctgcaggtgcatgacgaactgattttcgaggtcgaggacgaggatgtc
gaaaaggcgatgccgatcatcgtctcggttatggaaaacgccacgatgccggcgctcgaa
atgcgcgtgccgctcaaggtcgatgcgcgcgccgccaccaattgggacgaggcgcattaa
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