Rhizobium etli bv. mimosae Mim1: REMIM1_CH00423
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Entry
REMIM1_CH00423 CDS
T02778
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rel03016
]
REMIM1_CH00423 (truA)
Enzymes [BR:
rel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
REMIM1_CH00423 (truA)
Transfer RNA biogenesis [BR:
rel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
REMIM1_CH00423 (truA)
Prokaryotic type
REMIM1_CH00423 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGS20287
LinkDB
All DBs
Position
427842..428642
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AA seq
266 aa
AA seq
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MPRYRMTVEYDGGPYVGWQRQENGRSVQGAIEAAVLSLTGETVSVRGAGRTDSGVHAMGQ
VIHADLSKEWSPYQLQNALNAHLRLAGERVSILDVAAVPEFFDARFSALRRHYLYRIVSR
RAPLALEAGKAWWVPKTLDHEVMHAAAQRLVGRHDFSTFRSAHCQANSPVRTLDRLDVTR
SGALIEICATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVEAALEARDRKACGPVAPPDGL
YFLQVDYPEVITDRRRLPADESDDLS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctaccgcatgaccgtcgaatatgacggcggcccctatgtcggctggcagcgg
caagagaatggtcgctcggtgcagggtgcgatcgaagccgcggtgctgtcgctgaccggc
gagaccgtttcggtccgcggcgccggccgcaccgattccggcgtccacgccatgggacag
gtgatccatgccgatctttcgaaggaatggtcgccctaccagctgcagaacgccctgaat
gcgcatctgaggctggccggcgagcgcgtctccattctcgacgtcgcggcggttcccgaa
ttcttcgatgcccgcttctcggctttgcgccgccattatctctaccgcatcgtgagccgc
cgggcgccgctggcgctcgaagccggcaaggcctggtgggtgccgaagaccctcgaccac
gaggtcatgcatgccgccgcccagcggctggtcggccggcatgatttctccaccttccgc
tccgcccattgccaggcgaacagtccggtgcgcacgctcgaccggctcgatgtgacgcgc
agcggtgcgctgatcgagatctgtgccacagcgcagagcttcctccacaaccagatccgt
tccttcgccggtacgctgaagctcgccggcgagggcaaatggacgcccgacgatgtcgag
gcggcactcgaagcgcgcgaccgcaaggcctgcggcccggtggcgccgcccgacgggctc
tatttcctgcaggtggattatcctgaggtgatcaccgatcgccgtaggctgcccgccgac
gaaagcgacgatctctcatga
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