KEGG   Rhizobium etli bv. mimosae Mim1: REMIM1_CH00559
Entry
REMIM1_CH00559    CDS       T02778                                 
Name
(GenBank) DEAD/DEAH box type DNA/RNA helicase protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rel  Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:rel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rel03400]
    REMIM1_CH00559
Enzymes [BR:rel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     REMIM1_CH00559
    5.6.2.6  RNA 3'-5' helicase
     REMIM1_CH00559
DNA repair and recombination proteins [BR:rel03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    REMIM1_CH00559
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: AGS20415
LinkDB
Position
559108..561618
AA seq 836 aa
MDQIDSEASTLLPAAFTRWFAEKGWRPRAHQLELLARAESGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVVEMGLPVTVENRTGDT
PNAKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYVVLDELHSLVTSKRGHMLS
LGLARLRRDAPNLKTIGLSATVAEPMDLQKWLVPQQEGREHHAGLVVVEGGAKPDISILS
TDERIPWAGHSAKYAIPDVYKQLLDHQTTLLFVNTRSQAEMLFQELWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEVTSASPYADLSWETFERVVDFVATGGYALRTYERYARIRKTKEGRWRVSNP
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFIFSG
KVLRFEGIRENECLASQAFSLDPKIPAYNGGKFPLSTYLAEQVRAMIADPDRWRHLPDQV
RDWLSLQTDKSMLPKRDEFLIETFPRGSRFYMVAYPFEGRLAHQTLGMLLTRRLDRAGAK
PLGFVATDYSLAIWGLEDMGLMIGNGRLSLSDLFDADMLGDDLEAWLNESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDISRLG
DMLMRIRGHITHRPLDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgactccgaagccagcaccctgctgcctgccgcctttacccgctggttt
gcggaaaagggctggcgcccgcgcgcccatcagctggaactgcttgcccgcgccgagagt
ggcgaaagcacgctgctgattgcgccgaccggcgccggcaagacgcttgccggttttctg
ccgtcgctgaccgatctcacccgccgcggcagaatcccgcccggttccgccttcaccggc
attcacacgctctatgtctcgccgttgaaggcgctggcgatcgatatcgagcgtaacctg
atgaagcctgttgtggagatgggcctgccggtcaccgtcgaaaaccgcaccggcgatacg
ccgaacgccaaacgccagcgccaaaaactcaatccgccggatattctactgacgacgccc
gagcaggtcgccctgcttctcgccaaccgcgaggccgagcgtttcttcaaggatctgaaa
tatgtcgtgctcgacgagctgcattcgctcgttacctccaagcgcggccatatgctgtcg
ctcggccttgcccgcttgcgccgcgatgccccaaacctcaagaccatcggcctgtcggcg
acggtcgccgagccgatggatctgcagaaatggctggtcccccagcaggagggcagggag
catcacgccggcctcgtcgtcgtcgaaggcggcgccaaacctgacatttcgatactgtcg
accgacgagcgcattccctgggccggccattccgccaaatatgccattcccgacgtctac
aaacagctgctcgaccaccagacgacgctgctcttcgtcaatacccgcagccaggccgaa
atgctgttccaggagctctggacgatcaatgacgacaatctgccgattgccctccaccac
ggctcgctcgatgtcgcccagcgccgcaaggtcgaggcggcgatggccgaaaacaggctg
cgtgccgtcgtcgccacctcgacgctcgatctcggcatcgactggggcgatgtcgatctg
gtcatccatgtcggggcgccgaagggcgcatcccgtcttgctcagcgcatcggccgcgcc
aatcaccgaatggacgagccgtcgaaggcgatcctcgtgccggccaaccgcttcgaggtg
atggagtgccaggcagcgctcgacgccaattatatcggcgcacaggacacgccgcccgtc
ggccgcggcgcgctcgacgtgctcgcccagcacgtgctcggcatggcctgcgccgaaccc
ttcgacatgctggaactctatgacgaagtcaccagtgcctcaccttatgccgatctcagc
tgggagactttcgagcgcgtcgtcgatttcgtcgcgaccggcggttatgcgctcaggacc
tacgaacgttacgcccgcatccgcaagaccaaggaaggccgctggcgcgtctccaatcct
gctgtcgcccagcaatatcgcctcaacctcggcaccatcgtcgaaagcccgatgctgaac
atccgcatggtcaagcgcggcgagggcggccggattggccgcggcggcgcgacgctgggt
aaggtcgaggaatatttcctcgagcaattgtcgccaggagacaccttcatcttctccggc
aaggtgctgcgtttcgagggcatccgcgaaaacgaatgcctggcgtcgcaggccttttcg
ctcgatccgaagatccccgcctataatggcggcaagtttccgctgtcgacctatctcgcc
gagcaggtgcgggcgatgatcgccgatcccgaccgctggcgccatttgccggatcaggtg
cgcgactggctgtcgctgcagacggacaagtcgatgctgccgaagcgtgacgagttcctg
atcgaaaccttcccgcgcggcagccgcttctatatggtcgcctatcccttcgagggccgt
ctcgcccatcagacgctcggcatgctgctcacccgccggctggaccgggcgggcgccaag
ccgctcggcttcgtcgccaccgattactctctcgccatctgggggctggaagatatgggc
ctaatgatcggcaacggccggctcagcctttccgacctgttcgacgcggacatgctgggc
gacgatctcgaagcctggctcaacgaatccttcctgctgaagcgcaccttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatcccggcaaggaaaagagcggccgtcag
atcaccgtctccgccgatctgatctatgacgtgctccgcagccatgagccggatcacatc
ctcttgcaggcgacgcggcaggatgcggcgaccggacttttggatataagccgacttggc
gatatgctgatgcgaatcaggggccacatcacccatcgcccgctcgatcatatttccccg
ctcgccgtgccggtgatgctggagatcggacgggaggcggtgcccggcgaggcccacgat
gcgctattggccgaggcggcggacgatctgatcgccgaagctctggcataa

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