Rhizobium etli bv. mimosae Mim1: REMIM1_CH00583
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Entry
REMIM1_CH00583 CDS
T02778
Name
(GenBank) DNA helicase UvrD-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03420
Nucleotide excision repair
rel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
REMIM1_CH00583
03430 Mismatch repair
REMIM1_CH00583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_CH00583
Enzymes [BR:
rel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
REMIM1_CH00583
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
REMIM1_CH00583
MMR (mismatch excision repair)
Other MMR factors
REMIM1_CH00583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AGS20439
LinkDB
All DBs
Position
complement(592075..594135)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGSKAGVMADALTWSGTFHGIGARLLREYAQQIGLD
ADFTIHDREDSADLINLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCAAWEKQLRELFACYVEAKQAQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPQGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPPADIVTLDR
NYRSTQPILTAANAVIDLASERFTKNLWTERQSSERPRLVTVRDETDQARYVAEKVLDHR
EEGLKLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMSEDASPLSALAAMPAPPRSGEDWTAFVSMLQE
MKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPSDLAVGATAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSDAAAQAQARQVRIDVGARMRGIWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccgcagcagcgcatggccgtcgagcatggcacgctcacc
gacggcagccatattgccgggccgctgctggtcattgccggcgccggctccggcaagacg
aatacgctggcgcatcgggtcgcccatctgatcgtcaagggcgccgatccgcgccgcatc
ctgctgatgaccttttcacgccgcgcagcggcggaaatggcgcggcgcgtcgagcgcatc
tgccgcgacgtgctcggttcgaaggccggcgtcatggcggatgcgctcacgtggtccggc
accttccacggcatcggcgcgcggctcttacgcgaatatgcccagcagatcggcctcgat
gccgatttcaccatccatgaccgggaagacagcgccgacctgatcaacctgatccggcac
gatctcggcttctcgaagacggaaagccgctttccggccaagggcacctgccttgccatc
tatagcagggcggtgaattcggagaccgcgctcgaccaggtgctgcgcgacgcctttccc
tggtgcgcggcgtgggagaaacagctacgtgagcttttcgcctgctacgtcgaggcgaag
caggcccagaatgtgctcgattacgacgacctcttgctctactgggcgcagatggtcggc
gaaagcgtgattgccgaggatatcggcagtcgcttcgaccatgttctcgtcgacgaatac
caggacaccaaccggctgcaggcctcgatcctgatggcactgaagccgcaaggccagggg
ctgacggtcgtcggcgacgatgcgcagtcgatctattccttccgtgcagcgacagtccgc
aacattctcgattttcccgcggccttcagtccgcccgccgatatcgtcacgctcgaccgc
aactatcgctcgacgcaaccgatcctgacagccgccaacgccgtcatcgatctcgcctcg
gagcgcttcaccaagaatctctggaccgagcggcaatcctccgagcggccgcgcctagtg
acggtccgcgacgagaccgaccaggcgcgttacgtcgccgagaaggtgctcgaccatcgc
gaggaaggcctcaagctcaaacagcaggcggtgctgttccgcgcctcgcatcacagcggg
ccgttggaggtcgagctgacccggcgcaacattcccttcgtcaagttcggcggactgaaa
tttctcgacagcgcccatgtgaaggacatgctggccgcccttcgcttcgcgcagaacccc
cgcgaccgggtggcgggcttccggctgatgcagatcctgcccggcgtcgggccgtcgacg
gcgcagaaggcgctcgacctgatgtccgaggacgcgagcccgctatcggcgctggccgcc
atgccggcgccgccgcgctccggcgaggattggacggcattcgtttcgatgctgcaggag
atgaaatccggcaaggccggctggccggcggaaatcgagctggcgcggcaatggtacgcg
ccgcatctggaacggctgcatgaggacgcggcgacgcggcaggccgatttgttgcagctc
gagcagatcgccggcggctatgcctcgcgcgagcgtttcctcaccgagctcacgctcgat
ccgccggatgcgaccagcgaccaggccggcgtgccgctgctcgacgaggactacctcatc
ctctcgaccatccattcggccaagggccaggagtggacgagggtcttcatgctgaatgtc
gtcgacggctgcattccgagcgatcttgccgtcggcgccaccgccgaaatcgaggaagaa
cgccggctgctctatgtggcaatgacacgcgcccgcgatggtctcgacctcgtcgtgccg
cagcgcttcttcacctatgggcagaatgcgcagggcgaccggcatgtctatgcttcgcgc
agccgattcattccagcgaccctgctgcaattcttcgaggcctgcagctggccgcaggtg
aaatccgatgccgcggcgcaagcccaggcgcggcaggtgcgcatcgatgtcggcgcccgc
atgcgcggcatttggcgataa
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