Rhizobium etli bv. mimosae Mim1: REMIM1_CH00642
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Entry
REMIM1_CH00642 CDS
T02778
Symbol
secDF-1
Name
(GenBank) preprotein translocase subunit SecDF 1
KO
K12257
SecD/SecF fusion protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel02024
Quorum sensing
rel03060
Protein export
rel03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
REMIM1_CH00642 (secDF-1)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
REMIM1_CH00642 (secDF-1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
REMIM1_CH00642 (secDF-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rel02044
]
REMIM1_CH00642 (secDF-1)
Secretion system [BR:
rel02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
REMIM1_CH00642 (secDF-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
SecD-TM1
GGDEF_2
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
AGS20496
LinkDB
All DBs
Position
complement(644619..647168)
Genome browser
AA seq
849 aa
AA seq
DB search
MRTSPWLVLTYTVIIVVGILIALPNVLSQSVLQRIPSWLPHEQVSLGLDLRGGSHLVLEV
DEADLTKERLQSLLQDARRVLREKGIQPKAVVRNQNQIVVTLADASQSDAAVTDLKTLAN
PIGTGLSAGQADLTVTANGATITVAFSPAGISANVDNAVQQSLEVIRQRVDQVGVSEPTI
QRIGANRVLVQLPGAQDPSHLRELLGSTAKMSFHMLAPNNQPGPGVTMMQDDEGRSYPVL
DRVEISGDRLSDARVGFDPNTHEPIVSFRFDSAGATRFAEITRQNVGNPFAIVLDDKVLS
APVIREPITGGSGQISGNFSADSATTLAAMLRAGALPAKLTVIEERTVGADLGADAIKMG
IYSGIVGFILVAAFIFVLYGTWGILANVALLIHTILTFSALTLVGATLTLPGIAGVVLGI
GLAVDANVLINERIREETRKGKGAFAAIDTGFNRAYSTIIDGNMTALIAAAILFWFGSGP
VRGFAVTMALGLIISMFTSVAFVRVAMIEITRRRKFKVLNIRPLIPFSPYDKHIQFMKAR
FFGVTVSALLSIASVVLFIHPGLNYGVDFRGGIQMSVKTKEAADLAKFREGLDSLGLGEI
TLQTFGDNKSILVRAQRQEGGEEAQTAAVTKLKAEVAKIDPSATVEGTDVIGPKVSGELA
SAGILSVVIASFAMLIYIWVRFEWPFAVGAIVTLVLDVTKAIGFFAITGLDFNLTAIAAI
LTLVGYSVNDKVVVYDRMRENMRLYKSMPLREIIDKSINETLARSLYTNATAFLALVPMA
IWGGSAVSSFAIPMVFGILVAGASSIFIAAPILLFLGDWRRRHAMAVAATDAAAEIIPPD
ESRSRKSAS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacttcaccatggctggtgctcacctatacggtgatcatcgtagtgggcatcttg
atcgccctgccgaacgtcctgtcgcaatccgtcctccagcgcatcccttcatggctgccg
catgagcaggtgtcgctcggccttgaccttcgcggcggctcgcatctcgttctggaagtc
gacgaggcggatctgaccaaggagcggctgcagtcgctgcttcaggacgcccgccgcgta
ctgcgtgaaaagggcatccagccgaaggccgtcgtacgcaatcagaaccagatcgtcgtg
acgcttgcagacgcctcgcagagcgatgcggccgttaccgacctcaagacgctcgccaac
ccgatcggcaccggcctcagcgccggccaggccgacctgacggtcaccgcgaatggagcg
accatcaccgtagccttctcgccggccggcatctccgccaatgtcgacaacgccgtccag
cagagccttgaagtcatccgccagcgcgtcgaccaggtcggcgtctccgagccgaccatt
caacgtatcggcgctaaccgcgtgctcgtccagcttcccggcgcacaggatccgtcgcac
ctgcgcgaacttctgggttccacggcaaagatgtcgttccacatgctggcgccgaacaac
cagcccggccctggcgtcaccatgatgcaggatgacgaaggccgatcctatccggtgctc
gaccgcgtcgaaatctccggcgaccgcctttcggatgcgcgcgtcggcttcgaccccaac
acgcacgagccgatcgtcagcttccgcttcgacagcgccggcgctacccgctttgccgag
atcacccgccagaatgtcggcaatccctttgccatcgtcctcgacgacaaggtgctgagc
gctcccgtcatccgcgagccaatcaccggcggttccggccagatctccggtaacttctcg
gccgacagcgccaccacgcttgccgccatgctgcgcgccggcgccctgcccgccaagctg
accgtcatcgaggagcgcaccgtcggcgccgacctcggcgccgacgcgatcaagatgggc
atctattccggtatcgtcggcttcatcctcgtcgcggccttcatcttcgtgctctacggc
acctggggcatcctggcgaatgtggcgctgctgatccacacgatcctgaccttctcggcg
ctgacgctggtcggcgcaacgctgacgctgccgggtattgccggcgtcgttctaggcatt
ggcctcgcggtcgatgcgaacgtcctgatcaatgaacgtattcgtgaagagacccgcaag
ggcaagggcgcctttgccgccatcgatacgggtttcaatcgagcctattcgactattatc
gacggcaacatgacggccctgatcgctgcggccatcctgttctggttcggctccgggccg
gttcgcggctttgccgtgaccatggcgctcggcctgatcatctcgatgttcacttcggtc
gccttcgttcgcgtggcgatgatcgagattacccgccgccgcaagttcaaggtgctgaac
atccggccgttgatccccttcagcccctatgacaagcacatccagttcatgaaggcgcgc
ttcttcggcgtcaccgtttcggcgctgctttcgatcgcctccgtcgtgctctttatccat
cccggcctgaattacggcgtcgatttccgcggcggcatccagatgtcggtcaagacgaaa
gaggcggccgatctggcgaagttccgtgagggtctcgatagtctcggcctcggcgaaatt
acgctgcagaccttcggcgacaacaaaagcattctcgttcgggcgcagcggcaggaaggc
ggcgaagaggcgcagacagctgcggtgaccaagctgaaggccgaagtcgccaagatcgat
ccgagcgccaccgtcgaagggaccgacgtcatcggtccgaaggtcagcggcgagcttgcc
tcggccggcatcctgtcggtcgtgatcgccagcttcgcgatgctcatctatatctgggta
cggttcgaatggccctttgccgtcggcgccatcgttacgctggtgctcgacgtcaccaag
gcgatcggctttttcgcaatcaccggcctcgacttcaacctgacggccatcgccgccatc
ctgacgctcgtcggctattcggtgaacgacaaggtcgtcgtctacgaccgcatgcgcgaa
aacatgcggctctacaagtcgatgccgctgcgcgagatcatcgacaagtcgatcaacgag
accctggcgcgaagcctttataccaatgccacggccttcctcgccctggtgccgatggcg
atctggggcggcagcgccgtctcgagctttgcgatcccgatggtcttcggcattctggtg
gccggcgcctcgtcgatcttcatcgccgcaccgatcctgctcttcctcggcgactggcgc
cgccgccacgccatggcggtagcggcaaccgacgcggcggccgaaatcatcccgcctgac
gagagccgctcgcgcaagtcggcgagctga
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