Rhizobium etli bv. mimosae Mim1: REMIM1_CH00848
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Entry
REMIM1_CH00848 CDS
T02778
Name
(GenBank) RsuA/RluB/C/D/E/F family pseudouridylate synthase protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rel03009
]
REMIM1_CH00848
Enzymes [BR:
rel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
REMIM1_CH00848
Ribosome biogenesis [BR:
rel03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
REMIM1_CH00848
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGS20696
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Position
880803..882689
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AA seq
628 aa
AA seq
DB search
MTSKDKPKRPGAKPYSRDGGTKAGLKAGDARPAKAATARPAAAETESEAKAERISKVMAR
AGVASRRDIERMIMGGRVTLNGKVLDTPVVNVTLADRIEVDGVPIRGIERTRLWLYHKPA
GLVTTNADPEGRPTVFDNMPEELPRVMSIGRLDINTEGLLLLTNDGGLARALELPATGWL
RRYRVRAHGEIDQEALDKLKDGIAVDGVLYGSIEATLDRTQGSNVWITMGLREGKNREIK
NVLGALGLDVNRLIRISYGPFQLGDLPEGHVVEVRGRTLRDQLGPRLIEEAKANFDAPIY
NAPAVAAEEEEEAAAPAKRERPRRDEDKRERALSRLDTKRDDRRGAGRRDDDRRDGGRKD
DDKPKRSQPPGQRRSANVWMAPGARPLGEKAAAKAAKNAQTARRRGEQPAAKTNAFDRIE
DRPRTQINRVREEDGEWIRSSEQPRRKDEDEGFSRKRSFGDRPSRGERPFGDKPRGDRRP
RADGDERPRAARASAGEGRSERPRGDRPFGDRPSRGDRPFGDKPRGDRRPREEGDERPRA
ARSFAGEGRSERPRGERSFAGKSAGGKPSSDKPRGKGFGAKPGASKSFSGKPKGKPGSDR
PGGDRPAGGPSRGGARGKGMTRGADRRR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaaagacaagccaaaacgcccgggcgcaaagccctattcacgcgacggcggg
acaaaggccggcctgaaagcgggagacgccaggccggcaaaggctgcaaccgcgcgcccg
gctgcggccgaaaccgagagcgaggccaaggctgaacgcatttccaaggtgatggcgcgc
gcaggcgtcgcctcccgccgcgacatcgagcgcatgatcatgggaggccgcgtgacgctg
aacggcaaggttctcgacacgcccgtcgtcaacgtcacgcttgccgaccggatcgaggtc
gacggcgtgccgatccgcggcatcgaacgcaccaggctctggctctatcataagccggcc
ggtctcgtgaccaccaatgccgatccggaaggccggccgaccgttttcgacaacatgccg
gaagaattgccgcgtgtcatgtcgatcggccgcctcgacatcaacaccgaaggcttgctg
ctgctgaccaatgacggcggtcttgcccgcgccctcgaactgccggcgacgggctggttg
aggcgctatcgtgtgcgcgcccatggcgagatcgatcaggaagcgctcgacaagctgaag
gatggcatcgccgtcgatggcgtgctctacggctcgatcgaggcaacgctcgaccgcacg
cagggctcgaatgtctggatcaccatgggtcttcgcgaaggcaagaaccgtgagatcaag
aacgtgctcggcgctctcggcctcgacgtcaaccgtctgatccgcatctcctatgggccg
ttccagctcggcgacttgcctgaaggccatgtcgtcgaagtgcgcgggcgcacgctccgc
gaccagctcggcccgcgcctgattgaagaagccaaggcgaatttcgacgcgccgatctat
aacgccccggccgttgccgccgaggaagaagaagaggccgcggcgccggcaaagcgcgaa
cggccgcgccgcgacgaggacaaacgcgagcgagcgctgagccgcctcgacaccaagcgc
gacgatcgccgcggcgcggggcgcagagatgacgatcgccgcgacggtggccgtaaggat
gacgacaagccgaagcgttcccagccgcccggccagcggcgcagcgccaatgtctggatg
gcgccgggcgcacggccgctcggcgaaaaggcagcggccaaggctgccaagaatgcgcag
accgcacgccggcgcggcgagcagccagcggcaaagaccaatgctttcgatcgcatcgag
gatcgtccgcgcacgcagatcaatcgcgtgcgcgaagaggacggcgaatggatccgctcg
agcgaacagccccgccgcaaggatgaggacgaaggctttagccgcaagcgctctttcggc
gatcgtccttcgcgaggcgagcggcccttcggcgacaagccacgtggcgatcgcaggccg
cgtgcggatggcgacgagcgtccgcgtgccgccagggcctccgccggcgagggtcgttcg
gagcgcccgcgcggcgaccgcccgttcggcgatcgtccctcgcgtggagatcggcctttt
ggcgacaagccgcgcggtgatcgccggccgcgcgaggagggtgatgagcgtccgcgggca
gccagaagctttgccggcgaggggcgctccgagcgcccgcgtggcgaacgatcttttgcg
ggcaagtccgcaggcggcaagccttccagcgacaagcctcgcggcaagggattcggcgca
aagccgggcgcatccaagagtttctccggtaagccgaagggcaagccgggcagtgacagg
ccgggcggcgacaggcctgcgggcggcccgtccagaggtggtgcgagaggaaagggaatg
acgcgcggtgcggatcgtcggcggtga
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