Rhizobium etli bv. mimosae Mim1: REMIM1_CH01162
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Entry
REMIM1_CH01162 CDS
T02778
Name
(GenBank) pectin lyase fold/virulence factor domain-containing protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
Pectate_lyase_3
Motif
Other DBs
NCBI-ProteinID:
AGS21003
UniProt:
S5RT00
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Position
complement(1181139..1182506)
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AA seq
455 aa
AA seq
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MPSRRDMLLLLAASAVGGGTSRALASPLTAAAQPDLRGTIDAVEYRAVPESGDRKTRNLE
QMIKQAAAENVPVFLPPGTYRISNLTLPDNTRITGVPGASRIVYTGDGRLFAAENVRRIE
LSNLVIDGGNRWLDDYAGGLLQFTGVDEVLIDNCEIGGSRKHGLQLERCGGRIERSRISG
AAQSGLYAVDSANLSVTGNTIADCGNGGILVHRWKKAEDGTVVSGNRISNIRANDGGTGQ
NGNGINVFRADGVMVVNNHISDCAFTAIRANSASDVQISSNQCRRSGETAIYVEFSFEGA
VVSANMIDGAANGISIANFDEGGRLASVTGNVVRNLTLNGPYKHEVGFGIGIAAEADTLV
SGNVIEGAPRWGLQIGWGPYLRNVVVSGNVVRKAPVGCAVSVAEGAGAAVITDNIFQEVG
EGAVLGFEWDRQVSAEMAGGRAPYTQLTVERNRVS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgccttcacgccgcgacatgcttctccttctcgccgcctcggcggttgggggcgggaca
tcgcgcgcgcttgcctcgccgctgacggccgccgctcaacccgatctgcgcggcacgatc
gacgcggtggaatatcgcgccgttcccgaaagcggcgaccgcaagacccgcaacctggag
cagatgataaagcaggcggcggccgagaacgtgcccgtcttcctgccgcccggcacctac
cggatctccaatctcaccttgcccgacaatacccgcattacgggcgtgcccggcgcgtca
cggatcgtctataccggcgacggccgtctgtttgcggccgagaatgtgcggcgcatcgag
ctttccaatctcgtcatcgacggcggcaaccgctggctcgacgattatgccggcgggctc
ctgcaatttaccggcgtcgacgaggtgctgatcgacaattgcgagatcggcggcagccgc
aaacacggcctgcagctggagcgctgcggcgggcggatcgaacgcagccgcatttcgggc
gctgcccaatccgggctctacgcggtcgattccgccaatctttcggtcaccggcaatacg
atcgccgattgcggcaatggcggcattctcgtgcaccgctggaagaaggcggaggacggc
acggtggtttccggcaaccggatttccaacatccgcgccaatgacggcggcaccggccag
aacggcaacggcatcaatgtcttccgggccgacggggtgatggtggtgaacaaccatatt
tccgactgcgcgtttacggcaatccgcgccaattcggcctcggacgtccagatcagcagc
aaccaatgccggcgctccggcgagacggcgatctacgtcgaattctccttcgaaggggcg
gtcgtttccgccaacatgatcgacggagcggcgaacggcatctcgatcgccaatttcgac
gagggcggcaggctcgcaagcgtcaccggcaatgtcgtgcgcaatttgacgctgaatggc
ccctacaagcacgaggtcggcttcggcatcggcattgcggcggaagccgatacgctggtg
tccggcaatgtgatcgagggcgcgccacgctggggcctgcagatcggatgggggccttat
ctcagaaatgtcgtcgtcagcggcaatgtggtgcgcaaggcgccggtgggatgcgcagtc
tcggtcgccgagggggcaggcgcagccgtcatcaccgacaatatcttccaggaggttggc
gaaggggcggtcctcggctttgagtgggaccgacaagtctccgccgaaatggcgggcggc
cgcgcgccctatacgcagctgaccgtcgagcgaaaccgcgtgtcctga
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