Rhizobium etli bv. mimosae Mim1: REMIM1_CH01388
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Entry
REMIM1_CH01388 CDS
T02778
Name
(GenBank) lytic transglycosylase-like protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rel01011
]
REMIM1_CH01388
Enzymes [BR:
rel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
REMIM1_CH01388
Peptidoglycan biosynthesis and degradation proteins [BR:
rel01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
REMIM1_CH01388
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
DUF3731
TPR_16
Motif
Other DBs
NCBI-ProteinID:
AGS21221
LinkDB
All DBs
Position
complement(1413313..1415388)
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AA seq
691 aa
AA seq
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MKKAVLILTAFGFVAAAWGSLASPLPGEGIPTPDVKPIGFVPETSIPAALTTGAIPRNPA
VAPVASDLKTGLDALSAKNPQLALSIRDSMREGTLDRHILTWAIAVSGLKGVPSYEIASA
AQELKGWPGLSRLRAYSERALYDENPAPSAVLAAFGDTAPETMQGAVILGRALTASGKQA
QAAKYIRKVWRTEALDKASEDKILLEFSALLTPADHKARMDYLMYRGRVAQAKRFGDMGE
AQSLYKAWAAVDAKAANAGALLNSVEPKWRGDAGLLFAQIEYLRKQDKYAEAAALLEKMP
REPGELVNSGEWWNEQRIVSRGLVDQGQFRPAYRVVANSAATSPTDIVEAEFHAGWYALR
GLQDPTTAEKHFRKILATSNGPISVSRAWYWLGRAAEAGGTGNSGEFYGKAANFPGTFYG
QLAAERLGRKTLNVSYPTPSAADRQSFEAREAVQAIARLEAAGHGWRADILYLALADQLQ
SRGELAILAAQAEQSGNHHLSLQIGKIAYGRGIDVAALAFPVGVIPANANISGSGKALAY
AIARQESAFNPAAVSAANARGLLQLLPGTAQAVAKRHNITFSKDKLTADAGYNATLGAHY
LGEQIEAFGGSYILTFIAYNAGPKRVPEWIGRYGDPRGRPVDEIVDWIERIPFPETRNYV
QRVMENYEVYKARLGQPTDIERDLIGGRSAS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctgtcctgattctgaccgccttcggctttgttgccgccgcgtggggcagc
ctcgcgtcgccgcttcccggcgaaggcattccgacgcctgacgtcaagccgatcggcttc
gttcccgagacatcgataccggcagcgctgacaaccggcgccataccccgcaatccggcc
gtcgcgcctgtcgccagcgatctgaaaaccggcctcgacgcactgtccgccaagaatccg
caactggctctatcgatccgcgacagcatgcgcgagggtacgctcgaccggcatatcctc
acctgggcgatcgccgtctccggattgaagggcgttccctcttatgaaatcgccagcgcc
gcgcaggagctcaagggatggcccggcctttccaggctgcgcgcctattccgaacgtgcg
ctctacgacgaaaaccccgccccgtcagccgtgctcgccgctttcggcgacaccgcgccg
gagacgatgcagggcgccgtcattctcgggcgggcgctgactgcgtcaggcaagcaggcg
caggcggcaaaatatatccgcaaggtctggcgcaccgaggctctcgacaaggcgagcgaa
gacaagatcctcctcgagttttccgccctgctgacgccagccgaccacaaggcgcggatg
gactatctgatgtatcgtggccgggtggcgcaggccaagcgcttcggcgacatgggcgag
gcgcagtccctctacaaggcctgggccgccgtcgacgccaaagccgccaatgccggcgcg
ctgctcaatagcgtcgagccgaaatggcgtggcgatgccggcctgctgttcgcgcagatc
gaatatctgcgcaagcaggacaaatatgccgaagcggcggcgcttctggaaaagatgccg
cgcgagccgggcgaactcgtcaattccggagaatggtggaacgagcagcggatcgtcagc
cgcggcctcgtcgatcagggacaattcagaccggcctaccgcgtcgtcgcaaactccgcg
gcaaccagcccgacagatatcgtcgaggccgagttccatgccggatggtatgcgctgcgc
ggtctgcaggatccgacaacggcagaaaagcatttccgcaagattctggcgacttcgaac
ggtcccatctcggtgtcgcgcgcctggtactggctcgggcgggcagccgaggccggcgga
accggcaactccggcgaattctacggcaaggccgcgaattttcccggcaccttctatggg
cagctcgcggccgaaaggctcggacgcaagacgctcaacgtcagctatcccacgccgagc
gcagccgaccgccagagtttcgaggcgcgcgaggccgtgcaggcaatcgcccggcttgag
gcagccggccacggatggcgggccgacatcctctatctcgcgctcgccgatcagctgcaa
agtcgcggtgaactggcgatcctggcggcgcaggccgaacaatcaggcaatcatcatctg
tccctgcagatcggcaagatcgcctatggccgcggcatcgacgtcgccgcactcgccttt
cccgtcggcgtaatcccggccaatgccaatatctccggctccggcaaggcgctcgcctat
gccattgcccggcaggaaagcgcctttaacccggccgccgtttcggccgcaaatgcgcgc
ggcctgctgcagcttctgcccggcacggcccaagcggtggccaagcgccacaacatcacc
ttttcgaaggacaagctgacggccgatgccggctataatgcaacgctcggcgcgcattat
ctcggcgaacagatcgaagccttcggcggctcctacatcctcaccttcatcgcctataat
gccggcccgaagcgggtgccggaatggatcggacgctacggcgacccacgcggtcggccg
gtcgacgagatcgtcgactggatcgagcgcatccccttccctgaaacgcgcaactacgta
cagcgggtgatggagaattatgaagtctacaaggctcgcctcggccagccgacggatatc
gagcgcgacctgatcggcggacgcagcgcttcctga
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