Rhizobium etli bv. mimosae Mim1: REMIM1_CH01529
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Entry
REMIM1_CH01529 CDS
T02778
Symbol
rfbB
Name
(GenBank) dTDP-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00521
Streptomycin biosynthesis
rel00523
Polyketide sugar unit biosynthesis
rel00525
Acarbose and validamycin biosynthesis
rel00541
Biosynthesis of various nucleotide sugars
rel01100
Metabolic pathways
rel01110
Biosynthesis of secondary metabolites
rel01250
Biosynthesis of nucleotide sugars
Module
rel_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
REMIM1_CH01529 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
REMIM1_CH01529 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
REMIM1_CH01529 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
REMIM1_CH01529 (rfbB)
00525 Acarbose and validamycin biosynthesis
REMIM1_CH01529 (rfbB)
Enzymes [BR:
rel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
REMIM1_CH01529 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
AGS21360
LinkDB
All DBs
Position
complement(1550417..1551472)
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AA seq
351 aa
AA seq
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MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNPASLKSVESAPNYQFLHADIC
DRARMLQAFASFRPEIVMHLAAESHVDRSISSAADFIQTNIVGTFSLLDAARHYWDGLDA
RDKSSFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALFTIASR
GRPGEKYNVGGRNERRNIDVVHRICAILDGVYSDKAPHARLITKVTDRPGHDARYAIDAS
KLESELGWKAQETFETGIEKTVHWYLENEWWWRPLRENVYSGERLGVFKGQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggtaacgggcggagcgggcttcattggatcagcattggtgcgccatctg
gtcagcgagatcggcgccgaggtgctgaatgtcgacgcgctgacctatgccggcaacccg
gcctcgctgaaatccgtcgaatcggcgccgaactatcaatttctgcacgccgacatctgc
gaccgcgccagaatgctgcaggcattcgcgtcgttccgccctgagatcgtcatgcatctc
gcggccgagagtcatgtcgaccgctcaatctcgagcgcggccgatttcattcagaccaat
atcgtcggcacattcagcctgctggatgccgcacggcactattgggatgggcttgacgct
cgcgacaagagttcctttcgctttctgcatgtctcgacggacgaggtctacggctcgctc
ggcgacgagggtctcttcgaggagacgacgccttacgatccatcctcgccctactccgcc
tccaaggcggcaagcgatcatctggcgatcgcctggcaccggacctacggcctgcccgtc
gtcgtctccaattgctccaacaactacggcccgttccattttccggaaaaactcattccg
ctgatgattctgaacgcgctggaggggaagcctcttccggtttacggcaatggcgccaat
gttcgcgactggctctatgtcgaagaccacgcccgcgcgctcttcacgatcgcatccaga
gggcgccccggcgagaaatacaatgtcggcggccgcaatgagcgcaggaacatcgacgtc
gttcatcgcatctgcgctattctcgacggcgtctacagtgacaaggcaccgcatgcgcgt
ctgatcaccaaagtcaccgaccgccccggacacgacgcacgctacgcgatcgatgcctcg
aaactcgaaagcgaactcggctggaaggcgcaagagaccttcgaaaccggcatcgagaag
accgtgcactggtacttggaaaacgaatggtggtggaggccgctgcgcgaaaatgtctac
tccggcgaacgcctcggcgttttcaagggacagtaa
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