Rhizobium etli bv. mimosae Mim1: REMIM1_CH02118
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Entry
REMIM1_CH02118 CDS
T02778
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rel03032
]
REMIM1_CH02118 (gyrA)
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_CH02118 (gyrA)
Enzymes [BR:
rel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
REMIM1_CH02118 (gyrA)
DNA replication proteins [BR:
rel03032
]
Prokaryotic type
DNA Topoisomerases
REMIM1_CH02118 (gyrA)
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
REMIM1_CH02118 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
AGS21906
LinkDB
All DBs
Position
2104708..2107515
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AA seq
935 aa
AA seq
DB search
MTEQTPPGGGKLPPGIEPISIMEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKYHPHGNAAIYDALARMAQPWSLRLPLIDGQGNFGSV
DGDPPAAERYTECRLEKAAHSLLDDLDKETVDFRDNYDGTLSEPVVVPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVIDGCIALINDPAIELPELMQIIPGPDFPTGAKILGRAGIRSA
YETGRGSVIMRGVAAIEPMRGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLR
DESDRQGYRVVIELKRDANAEVILNQLYRYTPLQTSFGCNMVALNGGKPEQLTLLDMLRA
FVSFREEVVRRRTKFLLRKARERAHVLVGLAIAVANIDEVIRVIRQAPDPQSAREELMTR
RWPAEDVESLIRLIDDPRHRINDDLTYNLSEEQARAILELRLARLTALGRDEIGDELNKI
GEEIRDYLDILSSRVRIQTIVKDELSAVRDEFGTPRRTEIVDGGLEMDDEDLIAREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMTTRDEDFVSRLFVVNTHTPVLFFSSRGIVYK
EKVWRLPIGTPTSRGKALINMLPLEPGERITTILPLPEDEASWDNLDVMFSTTRGTVRRN
KLSDFVQVNRNGKIAMKLDEEGDEILSVETCTDRDDVLLTTALGQCIRFSVDDVRVFAGR
NSIGVRGINLGEGDRIISMTIVGHVDAEPWERAAYLKRSAAERRAIGVDEEDIALVGEEV
TEEGQLSDERYEELKAREQFVLTVSEKGFGKRSSSYDFRISGRGGKGIRATDTSKTGEIG
ELVAAFPVDDGDQIMLVSDGGQLIRVPVGGIRIASRATKGVTIFSTAKDEKVVSVERISE
PEEDDTEGAVDAAEGAAGADETPVADGDPGGAAQE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagcaaacaccccccggcggcgggaagctcccgccaggcatcgagcccatctcc
atcatggaggaaatgcagcggtcgtatctcgattacgccatgagcgtcatcgtcagccgc
gcgttgcccgacgtgcgcgacggtctgaagcccgtccaccggcgcatcctctacggcatg
tccgagctcggcatcgactggaacaagaaatacgtcaagtgcgcccgcgttaccggcgac
gtgatgggtaaataccatccgcacggcaacgccgcgatttatgacgcgcttgcccgcatg
gcgcagccctggtcgctgcgcctgccgctgatcgacggtcagggcaatttcggctccgtc
gacggcgatccgccggcggccgaacgctacaccgaatgccggctggaaaaggccgcccat
tcgctgctcgacgatctcgacaaggaaaccgtcgacttccgcgacaattatgacggcacg
ctctccgagccggtggtggttcccgccaagttcccgaacctgctcgtcaacggcgccggc
ggcatcgccgtcggcatggcgaccaatattccgccgcataacctgtcggaagtgatcgac
ggctgcatcgcgctgatcaacgatccggcgatcgagctgccggaactgatgcagatcatt
cccggcccggattttcccacaggcgcaaagatcctcggtcgtgccggcatccgctcggct
tacgagaccggccgcggctccgtcatcatgcgcggcgtcgcggccatcgagccgatgcgc
ggcgaccgcgagcagatcatcatcaccgagattccctaccaggtgaacaaggcgacgatg
atcgagaagatggccgagctggtgcgcgaaaagcgcatcgagggcatctccgacctgcgc
gacgaatccgaccgtcagggctatcgcgtcgtcatcgagctgaagcgcgatgccaacgcc
gaagtcatactgaaccagctttaccgctacacgccactgcagacctccttcggctgcaac
atggtggcgctgaacggcggcaagccggagcagctgacgctgctcgacatgctgcgcgcc
ttcgtctccttccgtgaggaagtcgttagacggagaacgaagtttctgctgcgcaaggcg
cgcgagcgcgcgcatgtgttggtcggccttgccattgcggtggccaatatcgacgaagtc
atccgcgtcatccgtcaggcgcccgatccgcagtcggcccgcgaagagctgatgacgcgc
cgctggccggcggaagacgtcgaaagcctgatccgcctgatcgacgacccgcgccaccgc
atcaatgacgacctgacctacaatctttccgaagagcaggcccgggccatcctcgaactc
cgacttgcccgcctcacggcccttggccgtgacgaaatcggcgatgaactcaataagata
ggcgaggaaatccgggattatctcgatattctctcctcgcgagtccgcatccagaccatc
gtcaaggatgagctttcggccgtccgcgacgagtttggcacgccgcgccgcaccgagatc
gtcgatggcggccttgaaatggacgacgaggatctcattgcccgcgaggatatggtcgtc
accgtctcgcatctcggctacatcaaacgcgtgccgctgaccacctaccgcgcccagcgc
cgcggcggcaagggccgctccggcatgacgacccgcgacgaggatttcgttagccggcta
ttcgtggtcaatacccatacgccggtcttgttcttctcgtcgcgcggcatcgtctataag
gagaaggtctggcgtctgccgatcggcacgccgacctcgcgcggcaaggcgctgatcaac
atgctgccgctcgaacccggcgagcgcatcaccacgatcctgccgttgcctgaggacgag
gcgagctgggataatctcgacgtcatgttctcgacgacgcgcggtacggttcgccgcaac
aagctgtcggacttcgttcaggtcaaccgcaacggcaagatcgccatgaagctcgatgag
gagggcgatgaaatcctctccgtcgagacttgcaccgatcgggacgacgttctcctgacg
acggcgctcggccagtgcatccggttctccgtcgacgacgtccgcgtttttgccggccgc
aactcgatcggcgttcgcggcatcaatctcggcgagggtgaccgcatcatctcgatgacg
atcgtcggccatgtcgatgccgagccatgggaacgggccgcctacctcaagcgctccgcc
gccgaacgccgggcgataggcgttgatgaggaggatatcgctctcgttggcgaagaagtc
accgaagaagggcagctttccgatgagcgctacgaagagctgaaggcgcgcgagcaattc
gtgctcaccgtctccgagaagggcttcggcaagcgctcctcctcttacgatttccgtatc
tccggccgcggcggcaagggcatccgtgccaccgacacgtcgaagacgggcgagatcggc
gaactggttgcggccttcccggttgatgacggcgatcagatcatgctcgtctccgatggc
gggcaactcatccgcgtgccggtcggcggcatccgcatcgccagccgcgccaccaagggc
gtcaccatcttctccacggccaaggacgagaaggtcgtctcggtcgaacgcatcagcgag
ccggaggaggatgacacggaaggggcggtcgatgcggccgaaggcgccgctggcgccgat
gagacgcctgtcgccgatggcgatccgggcggtgctgcccaagaatga
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