Rhizobium etli bv. mimosae Mim1: REMIM1_CH02352
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Entry
REMIM1_CH02352 CDS
T02778
Name
(GenBank) apolipoprotein type protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
GAS
DUF1664
Motif
Other DBs
NCBI-ProteinID:
AGS22132
UniProt:
S5SJ82
LinkDB
All DBs
Position
2334627..2341601
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AA seq
2324 aa
AA seq
DB search
MANNKYSESIEDKAFKALDEALQIDFGKDNVPSRRGDAPQAPEGNVSDPSNARNQQGQEE
AQRRSRRGAGAEQASRASAFAPANDASRNTPASILKSFDGASSRSAMRTATLFSVLWVMA
GLGLMSLLYAPQIWQIRSIADLVALPGVIAGLVGIIIPVMMFYAFAIMISRAQDMRNAAR
SMAEVALRLAEPETIASERIMTVGQAVRREVSAMNEGIERTIARASELETLVHSEVNALE
RSYADNELRVRGLVHELGSEREAIVNHADRIRTSIGSVHDQLKEELSLATEEIAVRLATS
GEAFASLIDTRAATILEKSDSALQSMGSLLAAKTDSLLQTLNASGFALATEFDNRLEALS
VNLNEHGERLLSQFETRASTMDSSTEKLNAALNERTHQLNEILIARTREINESLTSGERT
ISGTLDDVLSKLNSALDEKGATFRQSLQNTADDAVMDLDLRSGFFEERLQTTVAQLSTAF
DERVAEFTSAFDKRTGSLDTKLMESLARINETLSGGSDSIEGILSSSIDRLGSSMTDQSL
ALATALATGHEVLESTLNSHTEEITTALTSRTGELTSALQSATSDIALALASGTSDLHNN
LQARSAEFRDTLRTTTTDLTAAVAAGTEQVTTAFGGRAEELTSVLTARAAEIRDAVGTAH
ERIDSVMAERGGALIDALTTHHGRFEEALTTRSDAIINAVSGTHDRLSETLDEKAMALAI
SLNESQSRIEDTLETRSAAFLNAVSGTHERLSETLDTKAAALTTSLDERHARIEDALGTR
AEALLNSVSGTSDRLAETLDEKVMALAISLNESQARIEETLENGSAGLLNAVSGTHDRFA
ETLQDKAAAFANSLNETQARIEDTLETRSAALLNAVSGTHDRLSETLDEKAMALAISLTE
GQARIEDTLQTRSAALLNAVSGTHDRLSETLDEKAMALAISLNENQTRIEDTLEARSEAF
LKAVSGAHERIAETLDEKASALTASLNEGQSRLQDTLESRSESFLNAVSATHDRLSETLD
DRAMALAISLNESQSRLEETLTSGADAITNAVSGTHERLNGVLDQKASALAASLNEGQVR
LEEALGHRAAALVGAVTASHDRLTDTLDEKTMALAISLDDNQSRFDSALEARSNAIMEAV
TSAEARVAGAFADKTDAIHNAYADNQRRLESALSEHSAALSGVLDAGGARFEDLVGGLTG
RIEGRLSDAHARLGSMAEEAAARIEDGLASAHERIRTTLEDRGNAIELSLSQAHAQISDT
LTEQATSIGTSVATSVSMLEMSLEDREASIRQAIDAGAQTLEDRMRAGAGQIAGRFQEAA
NTISSSAQNLSAHLDQSVENLAGRLEETGSRMEAGLTAIETRIRDGVGGVAEKVEAATSQ
LSGVLTDGISRLGALGDEATQRISTTLEGSAANLTQAIDSRTANLAETLDSRTTTLTGAI
EGRTASLGETLDRGNERIEERLSTMDRALTVGLDAVNRTIEGKAAGLASTLRSAVAEAAQ
GMEGEATRTTELLGKTGQQFAQDLNAKSDEFTRTMDERSSQIVTRVAEAQNRLATQAAAV
AQTFSEAGNAIVNKVAEAETVVGTQVNAISRALSEAGQSLEARGNAIRTTLSGAGSEISA
TMADVERALEARSSAIRSNLEERAREIDTSLSDVDRALEARGNSIRSTLEERTRDLNSML
SGRSVELTRILDETARPIIDRYTDAGEQAAARITAAANLSADRLRAENEALASAVAARTE
NVANAVSAIENSLVGNVNGLVQRMSESSAAMAMMMNRAAEQLTSVDERLGETTTRFADSA
TKAAEMVNASTRLLEGKVDRLSDISGQTLAQVGSIIGRFDEHSKVLTQASQLLGAAQSNL
ASTLEEREGALQALSVSLVQRSDEIEKTMRGLGGMIETVFERAEQRSNQVTGNLRQGVQS
SFADIGRILTETEKRAQEAAETMREAITRAGDEANTTIDSTFANVERRSGDLSNRIRGGL
TASLSEVERMLGEAGRASDGAAQHMRESLREAIEDAVGRFSGATEDIRRSAADIRNELDA
TRAELKRGAFDLPEEAKESASAMRRAVAEQIKALQDISQLVGRSSQQLEISEPTARSLAQ
AQPTPRPTPPIVAQPPQPAAPPPIEAAGLRGTIAPSAPAATPQRAVQQPLPTRQELGRQE
PPRESGGWISDLLRGASREESADAAPARVPARSAETAAPAARSNDSRNPRHVVESLNSLS
VDIARAIDHDASVDLWRRYQRGERDVFTRRLYTLKGQQTFDEIKRKYDREPEFRTAVDRY
IGDFEKLLADVARTDPNQTVTQSYLTSDTGKVYTMLAHAAGRLR
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacaaatatagcgagtcgatcgaggacaaggcgttcaaggcgttggacgag
gcgctccagatcgacttcggcaaggataacgtgccgtctcgccgcggcgacgcgccgcag
gcgccggagggtaatgtgtctgatccatcgaatgcgcgcaatcagcagggccaggaagaa
gcgcagcgccgcagccgccgcggcgccggggccgagcaggcttccagggcttcggccttc
gcgcccgccaatgatgccagccgcaacacgcccgcctcgatcctgaaatccttcgacggc
gcttccagccgctcggccatgcgcaccgccaccctgttttccgtgctttgggtcatggcg
ggcctcggcctgatgtcgctgctttatgcgccgcagatctggcagatccgctcgatcgcc
gatctcgtcgccctgcccggcgtcattgccggcctggtcggcatcatcattccggtgatg
atgttctatgctttcgccatcatgatctcccgcgctcaggacatgcgcaacgccgcccgc
tccatggcagaggtggcattgcgcctggcggagccggaaaccatcgcctccgaacgcatc
atgaccgttggccaggcggtgcgccgcgaggtctcggcgatgaacgaaggcatcgagcgc
accatcgcgcgcgcttccgagctggaaacgctggttcattccgaagtcaacgctctcgaa
cgctcctatgccgacaacgagttgcgtgtgcgcggtcttgtccatgaactcggttcggag
cgagaggcgatcgtcaatcatgccgaccgcatccgcacctcgatcggcagcgtccacgac
cagctgaaggaagaactgtcgctggcgaccgaagagatcgccgtgcgactcgccacatcg
ggcgaagccttcgcctcgttgatcgacacgcgcgcggcgacgatcctggagaaatcggac
agcgccctgcagtcgatgggcagcctgcttgccgccaagaccgacagcctgctccagacg
ctcaacgcctccggctttgcgctcgccaccgaattcgacaaccgcctcgaagcgctttcc
gtcaacctcaacgaacacggcgaaagacttctcagccagttcgagacgcgcgcttctacc
atggacagcagcaccgagaagctgaacgcggcgctgaacgagcgtacgcatcagctaaac
gagatcctgatcgcccgcacccgcgagatcaacgagagcctgacatctggcgaacgcacc
atcagcgggacgctcgacgatgtgctctcaaagctgaacagcgcgctcgatgagaagggc
gcaaccttccgccagagcctgcagaacactgccgacgacgccgtcatggatcttgatctg
cgctccggcttcttcgaagagcgcctgcagacgaccgttgcccagctgtcgaccgccttc
gacgagcgtgtcgccgaattcaccagcgctttcgacaagcgcaccggctcgctcgacacc
aagctgatggagagccttgcccgcatcaacgaaacgctgagcggcggttcggattcgatc
gagggcattttgagctccagcatcgaccggctcggctcctcgatgaccgaccagtcactg
gcgctcgcgacagcgctcgcaaccggtcatgaagtgctggagagcacgctaaatagccac
accgaagaaatcaccaccgcactcaccagccgcaccggcgagctgacctcggctctgcag
agcgccacgtcggacatcgcgctggcgcttgcatcaggcacctccgacctgcacaacaat
cttcaggcccgctcggccgaattccgcgatacgctgcgcacaaccaccactgatttgacc
gccgccgttgccgccggcaccgagcaggtcacgacggccttcggcggccgcgccgaggaa
ctgaccagcgtattgacagcgcgcgccgcagaaatccgggacgcggttggcacagcccat
gagcgtatcgacagcgtcatggcggagcgcggcggagcgctgatcgatgcgctgaccacc
catcacggccgcttcgaggaagcgctgacgacccgctccgacgccatcatcaacgccgtt
tccggcactcatgaccgcctctccgaaacgctcgacgaaaaggcaatggcgctcgccatc
tcgttgaacgaaagccagagccgcatcgaagacacgctggagacccgttccgcagccttc
ctcaacgccgtctcgggcacgcatgagcggctgtcggaaacgctggataccaaggcagcg
gccctgacgacctcgttggacgagcgccatgcccggatcgaggacgcgctcggaacccgc
gccgaagcattgttgaacagcgtgtccggcacgagcgaccggcttgccgaaacccttgat
gaaaaggtgatggcgcttgccatttccttgaacgagagccaggcccggatcgaggaaacg
ctggaaaacggttccgcaggcctgctgaacgccgtctccggcacccatgaccggtttgct
gagacgctgcaagataaggcggcagcttttgccaactcgctgaacgagacgcaggcacgc
atcgaagatacgctcgaaacccgttccgcagccctgctgaatgcagtatccggcacccat
gaccgtctctccgagaccctggatgaaaaggcgatggcgcttgccatctcactgaccgaa
ggtcaggctcgcatcgaggacacgctgcagacccggtcggcggcgctgctgaatgccgtt
tccggcactcatgaccggctgtcggaaacactggacgagaaggcgatggcgctcgcaatc
tctctcaacgagaaccagacgcggatcgaagacacgctggaagctcgctccgaagctttc
ctcaaggcggtctccggtgcgcatgagcgtatcgccgaaacccttgacgagaaggcatcg
gcacttaccgcctccttgaacgaaggccagagccgcctgcaggacacgctggagagccgc
tcggaatccttcctgaatgcggtttcggccacccatgaccgcctgtccgagacgctcgac
gatcgagcgatggcccttgccatttcgctgaacgagagccagagccgcctcgaggagacg
ctgacatcaggtgccgacgcgatcaccaatgcggtctccggcacacatgaacgtctgaac
ggcgtgctcgaccagaaggccagcgccctggccgcctcgctgaacgaagggcaggtccgc
ctcgaggaagccctgggacaccgcgccgccgcgctcgtcggtgccgtaacggcaagccat
gaccggctcaccgatacgctcgatgaaaagaccatggcgctcgccatttcgctcgatgac
aaccagagccgcttcgacagcgccctcgaagcccgcagcaatgcaatcatggaggccgtc
accagtgcagaggcccgcgtcgccggcgcctttgccgacaagacagacgccatccacaac
gcctatgccgacaatcagcggcggcttgaatccgccctctccgagcacagcgcggcgctt
tcgggcgttctcgatgcgggcggtgcccgcttcgaggatctcgtcggcggcttgaccggg
cgcatcgaaggccgcctcagcgatgcccatgcgcggctcgggagcatggccgaggaggcc
gcggcgcgcatcgaagacgggctcgcttctgcccatgagcgcatccgcacgacgcttgag
gatcgcggcaatgccatcgagctgtcgctgagccaggcgcatgcgcagatcagcgatacg
ctgaccgaacaggcgaccagcatcggcacttcggtggcgacaagcgtcagcatgcttgaa
atgtcgctggaagaccgtgaagcctcgatccgccaggcgatcgatgccggtgcccagaca
ctggaagatcgtatgcgtgccggcgctggtcagattgccggccgcttccaggaggcggcg
aacacgatttcgagctccgcccagaacctatccgcccatctcgaccagtcagtcgagaac
cttgcgggacgtcttgaagaaaccggttctcgcatggaggccggtcttacggcgatcgag
acccgcatccgtgacggcgtcggcggcgttgccgaaaaggtcgaagccgccaccagtcaa
ctctccggcgtgcttaccgacggcatttcccggctcggcgcgctcggtgacgaggccacc
caacgcatctcgacgacgctcgaaggcagcgccgccaatcttacgcaggcaatcgacagc
cgcaccgccaatctggcggagacgctggacagccgcacgaccacgctcacaggcgccatc
gaaggccgcacggcaagtctcggcgaaacccttgaccgcggcaacgaacgcatcgaggaa
cgcctctccaccatggatcgcgcgttgaccgtcggcctcgacgctgtcaaccggaccatc
gagggcaaggccgccggcctcgcctcgacgctgcgtagcgcggtggccgaagcagcccag
ggaatggaaggcgaagcgacgagaacgactgaactgctcggcaagaccggccaacagttc
gcccaggatctcaatgcgaaaagcgacgaattcacccgcaccatggatgagcgctcgtcg
cagatcgtcacgcgggttgccgaagctcagaaccgcctggcaacccaggccgctgctgtc
gcccagaccttctcggaagccggtaatgccatcgtcaacaaggtcgccgaggccgagacg
gttgtcggcacgcaggtcaatgccatttccagggcgttgtcggaggccggccagtctctc
gaggcgcgcggcaatgccatccgcacgacgctgtcgggggccggcagcgagatctccgcc
accatggcggatgtcgagcgggcgctcgaggcccgcagcagcgccatccgctccaatctc
gaagaacgtgcccgcgagatcgatacctccctctccgacgtcgaccgggcgctcgaagcg
cgtggcaactcgatccgctcgacgcttgaggaacgcacccgcgacctcaactcgatgcta
tcaggccgctctgtcgaattgacccgtatcctcgacgaaacggcccgcccgatcatcgat
cgctacaccgatgccggcgaacaggccgctgcccgcatcaccgcggcagccaacctcagc
gccgatcgcctgcgcgccgagaacgaagcgctcgccagcgccgtcgccgcccgcaccgag
aatgtcgctaacgccgtcagcgccatcgagaacagcctggtcggcaacgtcaacggcctg
gttcagcgcatgtcggaaagcagcgcggcgatggcgatgatgatgaaccgcgccgccgag
cagctgacgagcgtcgacgagcgtctcggcgaaaccacgacccgctttgccgactccgcc
accaaggctgccgaaatggtcaacgcctcgaccagacttctcgaaggcaaggtcgaccgc
ctctccgacatctccggccagacgctggcccaggtcggcagcatcatcggccgcttcgac
gaacactccaaggttctgacccaggcctcgcagcttttgggtgccgcccagtccaacctc
gcctcgacgctcgaggagcgtgaaggcgcgctgcaggccctctccgtcagtctggtccaa
cgctccgacgagatcgagaagaccatgcgcgggctcggcggcatgatcgagaccgtgttc
gagcgggccgagcagcgctccaaccaggtcaccggcaacctgcgccaaggtgtacagtcc
tcctttgccgatatcggccgcattctgacggaaaccgagaagcgcgctcaggaagcggcc
gaaacgatgcgcgaggcgatcacccgcgccggcgacgaggccaatacgacgatcgacagc
accttcgccaatgtcgagcgccgttccggcgatctctccaaccgtattcgcggcggcctc
accgcctcgctgtcggaagtcgagcgcatgctcggcgaagccggccgcgcctccgacggt
gccgcccagcacatgcgggaatcgttgcgtgaggcgatcgaggatgccgtcggtcgcttc
tccggcgccaccgaggacatccgccgctccgctgccgacatccgcaacgaactcgacgcc
acccgcgccgaactgaagcgcggcgccttcgacctgcccgaggaagccaaggaaagcgcc
tcggccatgcgccgcgccgtcgccgaacagatcaaggccctgcaggatatctcgcagctt
gtcggccgctccagccagcagctcgaaatctccgagcccaccgcccgctcgcttgcccag
gcgcagccgaccccgcgcccgaccccgccaatcgtagcccagccgccgcagccggcagcg
cctccgccgattgaagcggcgggtctgcgcggaacgattgcgccgtccgctccggccgcc
actcctcagcgggccgttcagcagccactccccactcgccaggagttgggccggcaggaa
ccgccgcgggaaagcggcggctggatcagcgatcttctgcgaggagcatcccgcgaagaa
tccgcggacgcggcgccggcccgtgttcccgcccgctcggcggaaaccgccgcaccggcc
gcacgcagcaacgacagccgcaatccgcgccatgtcgtggaatcgctgaattcgctctcc
gtcgatatcgcccgcgccatcgatcacgatgcgtcggtcgatctctggcgccgctaccag
cgcggcgagcgcgacgtcttcacccgccgcctctacacgctgaagggccagcagaccttc
gacgagatcaagcgcaaatacgaccgcgaaccggaattccgcaccgccgtcgatcgctac
attggcgatttcgaaaagctgctcgccgacgtcgcccgcaccgacccgaaccagactgtc
acccagtcatatctcacctcggatacgggcaaggtctacaccatgctcgcccatgcagcg
ggcaggctccgctag
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