Rhizobium etli bv. mimosae Mim1: REMIM1_CH02506
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Entry
REMIM1_CH02506 CDS
T02778
Symbol
cobB
Name
(GenBank) cobyrinic acid a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00860
Porphyrin metabolism
rel01100
Metabolic pathways
rel01240
Biosynthesis of cofactors
Module
rel_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
REMIM1_CH02506 (cobB)
Enzymes [BR:
rel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
REMIM1_CH02506 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
REMIM1_CH02506 (cobB)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
Fer4_NifH
SNO
Motif
Other DBs
NCBI-ProteinID:
AGS22280
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Position
complement(2489018..2490325)
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AA seq
435 aa
AA seq
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MSGLLIAAPSSGAGKTTVTLGLLRALRRRGIPVAPGKAGPDYIDPAFHAAASGTLCLNFD
PWAMRPELISANATLHRSGDRILVVEAMMGLFDGAADGKGTAADLAAQLGLSVVLVIDAS
RMSQSVAPLVAGFAGFRADVRVAGVILNRVGSERHEGMLRQALEAIRMPVIAVIRSDKAL
ALPARHLGLVQAGEHASLEGFIEHAADAVSEECNFEFLLRIARQGLNRPSAANIDRLPPL
GSRIAVARDIAFAFSYEHMLLGWRRRGAAISFFSPLADEAPAADADAIYLPGGYPELHAG
TLSQAPNFRAALVDAAARGIRIYGECGGYMVLGEGLIDAEGKRHEMLGLLPVVTSYAAHK
RHLGYRHVMPLDGAIFKRAMTAHEFHYSTLISEGEGERLFQVRDALGTDLGPAGLRRGQV
AGSYMHLIDLAGISA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctcctgatcgcagctccttcttccggtgccggcaagacgacggtgacgctc
gggctgctcagagccttgcgtcggcgcggcatcccggtcgcgcccggcaaggccggcccc
gactatatcgatcccgccttccatgccgctgcgagcggcacgctctgcctgaatttcgat
ccctgggcgatgcggccggagctgatctcggccaatgccacgctgcaccgctccggtgac
cgcattctcgtcgtcgaggcaatgatgggactgttcgacggggcggccgacggcaagggg
acggcggcggatctggccgcccagctcggcctttccgtggtactggtcatcgacgcttcg
cgcatgtcgcaatcggtagcgccgctggtggcgggttttgccggtttccgcgccgatgtg
cgcgttgccggcgtcatcctcaacagggtcggcagcgaacggcacgaggggatgctgcgt
caggcgctcgaggcgatccgcatgccggtgatcgccgtgatccgcagcgacaaggcgctg
gccctgcccgctcgccatctcggccttgttcaggccggtgagcatgcaagcctcgaaggt
ttcatcgagcatgcggcggatgccgtctccgaggaatgcaatttcgagtttctgctgcgc
atcgccaggcagggcctcaaccggccgtcggctgccaatatcgatcgcctgccgccactc
ggcagtcgcattgcggtggcccgcgatatcgctttcgccttttcctatgaacatatgctg
cttggctggcggcggcggggtgccgcgatttccttcttctcgccgctcgccgacgaagcg
cctgctgccgatgcggatgcgatctatctgccgggtggctatcccgagctgcatgccgga
acgctttcccaggcgccgaatttccgcgccgcccttgtcgatgcggcggcgcgcggcatc
cggatctatggcgagtgcggcggctacatggtgctcggcgaaggactgatcgacgcagag
ggcaagcgtcacgagatgctcggcctgctgcccgtcgtcacgagctatgccgcgcacaaa
cgccatctcggttatcgtcacgtcatgccgctcgacggtgcaatctttaagcgggcgatg
acggcgcatgaattccactattccaccctcatttcggaaggcgagggcgagcggctgttt
caggtgcgggatgcgctcggaaccgatctcggcccggcgggactccggcgcgggcaggtg
gcgggttcctacatgcatttgatcgatctcgccgggatctccgcatga
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