Rhizobium etli bv. mimosae Mim1: REMIM1_CH02897
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Entry
REMIM1_CH02897 CDS
T02778
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00470
D-Amino acid metabolism
rel00550
Peptidoglycan biosynthesis
rel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
REMIM1_CH02897 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
REMIM1_CH02897 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rel01011
]
REMIM1_CH02897 (murD)
Enzymes [BR:
rel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
REMIM1_CH02897 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rel01011
]
Precursor biosynthesis
Amino acid ligase
REMIM1_CH02897 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
2-Hacid_dh_C
MurD-like_N
NAD_binding_2
KARI_N
TrkA_N
NAD_Gly3P_dh_N
F420_oxidored
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGS22656
LinkDB
All DBs
Position
complement(2868910..2870322)
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AA seq
470 aa
AA seq
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MIPVTTLKDRKVALFGLGGSGFATARALIAGGAEVTAWDDNPDSVAKASAEGIRTEDLHG
IDWSQQALFVLSPGVPLTHPKPHWTVDLARAAGVDIVGDVELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKSAGYDTQLGGNIGTAVLTLDPPKAGRYYVVECSSYQIDLAPTL
NPSAGILLNLTPDHLDRHGTMQHYADVKERLVAGSDVAIVGIDDSHSALIADRVERAGVK
VVRISRRNAVASGIYAEGIRLVQAVGGAMLPFADLDGIQTLRGSHNAQNAAAAVAACLAV
GVSADAIRAGLASFPGLKHRMQPVGKRGRVVFVNDSKATNADAAAPALSSYDRIYWIAGG
LPKAGGITTLAPYFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLERAVVHAAADAERD
EAAASAVMLSPACASFDQYRNFEVRGDAFVSHVAALDGMTMLIGPATGEK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacgacgctcaaggacaggaaggtcgcgctcttcgggcttggtggctcc
ggttttgccactgcccgcgcgctgattgcgggcggcgccgaggtgaccgcctgggacgat
aatcccgacagcgtcgccaaggcttcggcggaaggcatccggacggaagacctgcatggc
atcgactggagccagcaggcgctgtttgtgctgtcgcccggtgtgccgctcacccatccg
aagccgcactggaccgtcgacctcgcgcgggcggccggcgtcgacatcgtcggcgatgtc
gagctcttcgtgcgcgagcgccgcgcccatgcgccggattgccccttcatcgccatcaca
ggcactaacggcaagtcgacgacgacggcgctgatcgcccatatcctgaaatccgcaggc
tacgacactcaactcggcggcaacatcggcacggcggtgctgacgctcgatccgccgaag
gcggggcgttattacgtcgtcgaatgctcgtcctaccagatcgatctggcgccgacgctg
aacccctccgccggcatcctgctcaacctgacgcccgatcatctcgaccgccacggcacg
atgcagcactacgccgacgtcaaggaacgactggtcgcgggcagcgatgtcgcaatcgtc
ggcatcgatgacagccattcggcgctgatcgccgaccgcgtcgagcgggcaggtgtcaag
gtggtccgaatctcgcgccgcaacgcggtggcatcaggcatttatgccgagggcatcagg
ctcgttcaggccgtcggcggcgccatgctgccctttgccgatctcgacggcatccagacg
ctgcgcggcagccacaatgcccagaatgccgccgcggccgttgccgcctgccttgccgtc
ggggtttccgccgacgccattcgcgccggtcttgcctcttttcccggcctcaagcaccgc
atgcagcccgtgggcaagcgaggccgcgtcgtcttcgtcaacgattcgaaggcgacgaat
gccgacgcggcggcgccggcgctttcgagctacgaccgcatctactggattgccggcggc
ctgccgaaggcgggcggcatcacgacgctcgcgccctatttcccccgcatcgccaaagcc
tatctgatcggcgaggcggcggcggagttcgccgccacactcggcgaggccgtgccctac
gagatctccggcacgctggagcgcgcagtcgtacacgcggcggccgatgcggagcgcgac
gaagctgctgcttccgccgtgatgttatccccggcttgcgcaagcttcgaccagtatagg
aacttcgaagtcaggggcgatgccttcgtcagccacgtcgccgcccttgacggaatgacg
atgctgatcggtccggcaacaggagagaaatga
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