Rhizobium etli bv. mimosae Mim1: REMIM1_CH02994
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Entry
REMIM1_CH02994 CDS
T02778
Symbol
dnaG
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REMIM1_CH02994 (dnaG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rel03019
]
REMIM1_CH02994 (dnaG)
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_CH02994 (dnaG)
Enzymes [BR:
rel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
REMIM1_CH02994 (dnaG)
Messenger RNA biogenesis [BR:
rel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
REMIM1_CH02994 (dnaG)
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
REMIM1_CH02994 (dnaG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
GARS_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGS22749
LinkDB
All DBs
Position
complement(2965748..2967616)
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AA seq
622 aa
AA seq
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MPLSERNAPGFSASDALFSAGRSPLDVLKQIYGYSSFRGKQQQVVEHVVSGGDAVVLFPT
GAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
ALSAGKLDLLYVTPERILTDGFRELIASEKIALFAIDEAHCVSQWGHDFRPEYRELGRLG
EQYPGVPRVALTATADPHTRDDIIERLGLGNAEIFTTSFDRPNIAYEIVERDQPRQQLLR
FLSGHKGNSGIVYCLSRAKVEDTADWLNGQGIRALPYHAGMDRALRDSNQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRR
RMIDEGNAADEIKRVERAKLSALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVE
TWEGTEAAIKALAAVYRTGERFGAGHVIDVLVGNINEKTERFGHVNMPVFGAGKDIPART
WQSVYRQLLAMGLIRIDHEAYGALKLEPEARAVFKSERQVFFRKDRPASERRTKKAERSE
RKSALSGADGSLFEALRAERMAIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLGISGV
GQAKLDRYGDAFLEIILSHDKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagcgaacgcaatgcaccaggtttttccgcttccgatgcgctgttttccgcc
ggccgctcaccgctcgacgtcctgaagcagatctatggctattcctccttccgcggcaag
cagcaacaggtggtcgagcacgtggtttcgggcggcgatgccgtggtgctctttccgaca
ggtgcgggcaaatcgctctgcttccagatcccggcgctttgccgtgacggcgtcggcatc
gtcgtttcgccactgattgcgctgatgcgcgatcaggtggaggcgatgaagcagctcggc
atcagggctgcggcactcaattcgtcgctgtcgcgcgaggagtttgtcgaggttcgccgt
gcgctttcggccggaaagctcgaccttctctacgtgacgcccgagcgtatcctgacggac
ggttttcgcgagctgatcgccagtgagaaaattgcgttgtttgcgatcgacgaggcccac
tgcgtctcgcagtggggccatgatttccgcccggaatatcgcgaactcggccggctcggc
gaacagtatcccggcgtgccccgcgtggcgctgacggcaacggccgacccgcatacgcgc
gacgatatcatcgagcggctggggctcggcaatgccgaaatcttcaccaccagcttcgac
aggccgaatattgcctatgaaatcgtcgagcgcgaccagccgcgccagcagcttctgcgc
ttcctctccggccataagggcaacagcggcatcgtctattgtctgtcgcgcgccaaggtc
gaggatactgccgattggctgaacgggcagggcatccgcgcgctgccctatcatgccggc
atggaccgggcactgcgcgacagcaatcaggatgctttcctgaaagaagagaatctctgc
ctggtcgcgaccgtcgccttcggcatgggcatcgacaagccgaatgtgcgctatgtcgcc
catctcgacctgccgggttcggtggaggcctattatcaggaaaccgggcgcgccggccga
gacgggctgccgtccgaggtctggatggcctacggcatggccgacgtcatccagcgccgc
cgcatgatcgatgagggcaacgccgcagacgaaatcaagcgggtcgagcgcgccaagctg
agcgccttgctggcgatctgcgaaaccgcctcctgccgccggcaggcgatccttgcccat
ttcggcgaggcgcatgccggccaatgcggtaattgcgacacctgcctgaagccggtcgag
acctgggaaggcacggaagcggcgatcaaggcgctcgctgccgtctaccgcaccggcgag
cggttcggcgcgggtcatgtcatcgacgtgctggtcggaaacatcaacgaaaagaccgag
cgtttcggccatgtgaatatgccggtctttggcgccggcaaggacattcctgcgcgcaca
tggcaatcggtctaccgccagctgctcgccatggggctgatccgtatcgatcatgaggcc
tatggggcgctgaagctggagccggaggcgcgcgccgtcttcaagtctgaacggcaggtt
ttcttccgcaaggacaggccggcctcggaacggcgcacgaagaaggccgagcgcagtgag
cgcaaatcggccctctcgggcgctgacggcagcctgttcgaggcgttgcgggccgagcgc
atggcgatcgccaaatcgctcggcgtgccgccctatgttgtctttcccgacacgacgctc
attgcattcgcgacggaacggccgcgaagccgcaaggaactgctcggcatttctggagtc
ggacaggcaaagctcgaccgctatggtgacgctttcctggagatcattctctcgcacgac
aaggattga
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