Rhizobium etli bv. mimosae Mim1: REMIM1_CH03228
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Entry
REMIM1_CH03228 CDS
T02778
Symbol
xylF
Name
(GenBank) xylose ABC transporter substrate-binding protein XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
REMIM1_CH03228 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rel02000
]
REMIM1_CH03228 (xylF)
Transporters [BR:
rel02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
REMIM1_CH03228 (xylF)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
DUF6856
Motif
Other DBs
NCBI-ProteinID:
AGS22977
LinkDB
All DBs
Position
3208125..3209165
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AA seq
346 aa
AA seq
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MKSILKLMAGAAILVSVHTAAMAADLVVGVSWSNFQEERWKTDEAAIKKALEAKGAKYIS
ADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAIEKAAAEGIPVVGYDRLIENPA
AFYITFDNKEVGRLQAQGVFKAKPEGNYVFIKGSSSDPNADFLFSGQQEVLKAAIDAGKI
KNVGEAYTDGWLPENAQRNMEQFLTANNNKVDAVVASNDGTAGGAIAALDAQGLAGSVPV
SGQDGDKAALNRIALGTQTVSVWKDSRELGKRAAEIALDLAGGKDMSKIEGAQAFKGGPK
GVEMQSVFLKPLAITKDNLNVVIDAGWISKAEACQGVKAGTVAACK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctattttgaaattgatggccggcgccgccatcctcgtttccgtgcacaccgcc
gccatggctgccgacctcgtcgtcggcgtttcctggtcgaatttccaggaagagcggtgg
aagacggacgaagccgccatcaagaaggcgctcgaagccaagggcgcaaagtacatttcc
gctgatgcacagtcttctgccgccaagcagctgaccgacgtcgaatcgctgatctcgcag
ggcgccaacgcgctgatcatccttgcccaggactccgacgccatcggcccggcgatcgaa
aaggccgctgccgaaggcattccggtcgtcggctacgaccgtctgatcgaaaacccggct
gccttctacatcaccttcgacaacaaggaagtcggccgcctgcaggctcagggcgtcttc
aaagccaagccggaaggcaactacgtcttcatcaagggctcgtcttccgacccgaacgcc
gatttcctgttctccggccaacaggaagtgctgaaggctgcgatcgacgccggcaagatc
aagaatgtcggcgaagcctataccgacggctggctgccggagaacgcccagcgcaacatg
gagcagttcctgaccgccaacaacaacaaggttgacgccgtcgtcgcctccaatgacggc
acggccggcggcgcaatcgcagccctcgacgcccagggcctcgccggctccgttccggtg
tccggccaggacggcgacaaggcggcgctgaaccgcatcgccctcggcacgcagacggtt
tccgtatggaaggacagccgcgaactcggcaagcgcgccgccgaaatcgctctcgacctc
gccggcggcaaggacatgagcaagatcgaaggcgcacaggccttcaagggcggcccgaag
ggcgtggaaatgcagtcggtcttcctgaagccgctggcgatcaccaaggacaatctgaac
gtcgtcatcgacgccggctggatttccaaggctgaggcctgccagggtgtgaaggccggc
acggttgctgcctgcaaataa
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