Rhizobium etli bv. mimosae Mim1: REMIM1_CH03914
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Entry
REMIM1_CH03914 CDS
T02778
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rel03036
]
REMIM1_CH03914 (xerD)
Chromosome and associated proteins [BR:
rel03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
REMIM1_CH03914 (xerD)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AGS23629
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Position
3931159..3932112
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AA seq
317 aa
AA seq
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MMDLSRVHVESFLEMMSAERGAAANTLQSYERDLDDVRSFLNGRSIRLTEAASADLAAYL
ASLARQGFKPSSQARRLAAMRQFYKFLYAEGLRTDDPTGVLDAPKKGRPLPKTMGVEEVG
RLLSQAQTEADDPAPGQLQRRRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGK
GNKERLVPLSHSAIAALKSYGRLLAAENAAAKEPQESPWLFPAASKEGYLPRQVFARDLK
NLAIRAGLTPSLISPHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQ
QLVQTHHPLAKQAKKHE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatggatctaagccgcgtccacgtggaatccttcctggaaatgatgagcgccgaacgt
ggcgcggccgccaacactctgcaatcctatgagcgcgacctcgatgacgtcaggtccttc
ctgaacggccgcagcattcggctgaccgaagccgcctccgccgatctggccgcctatctc
gcctcgctcgcccgccagggcttcaagccctcctcgcaggcgcgcaggcttgcggccatg
cggcagttctacaagttcctctatgccgagggcctgaggaccgacgatcccacaggcgtc
ctcgatgcgccgaagaaggggcggccactgccgaagacgatgggggtcgaggaggtcggc
aggcttctttcccaagcgcagaccgaggccgatgatccggccccgggtcaactgcagcgc
cggcgcatgctggcgctcttagaactgctttatgccaccggcatgcgcgtcagcgagctc
gtctcactccccgcccgcgtgctcgaccaagagggccgcttcctgatgatccgcggcaag
ggcaacaaggagcgcctggtgccgttatcgcattcggcgattgcagcgctgaaatcgtat
gggcgtctgctggccgccgaaaatgccgcggccaaggagccgcaggaaagcccctggctg
tttccggccgcctcgaaggagggctatctgccgcgtcaggttttcgcccgcgacctcaag
aacctggcgatccgcgccggcctgacgccgtcgctgatctcgccacacgtcatgcgtcac
gccttcgccagccatctgcttgccaacggcgccgacctgcgcgtcgtgcaggaactcctc
ggccattcggacatttcgaccacacagatctacacgcatgtgctcgaagagcggctgcag
cagctcgtccagacgcatcacccccttgccaaacaggcgaaaaagcacgaatag
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