Rhizobium etli bv. mimosae Mim1: REMIM1_CH04124
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Entry
REMIM1_CH04124 CDS
T02778
Symbol
rpoH-2
Name
(GenBank) RNA polymerase sigma-32 factor RpoH 2
KO
K03089
RNA polymerase sigma-32 factor
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rel03021
]
REMIM1_CH04124 (rpoH-2)
Transcription machinery [BR:
rel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
REMIM1_CH04124 (rpoH-2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
KORA
HTH_23
Sigma70_r3
HTH_3
HTH_10
RNase_E_G
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AGS23834
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Position
4142092..4142955
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AA seq
287 aa
AA seq
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MKNMSADRRMIKIAMAAPYLARQEEHDLATRWKDHDDRGARNQIAMAHMRLVISMAGKFR
NFGLPMSDLVQEGYVGLLEAAARFEPERDVRFSTYASWWIRASIQDYILRNWSIVRGGTS
SAQKALFFNLRRLRAKLARGDTQLTLQSIHQEIAAALGVSLADVQTMDARLSGNDASLQA
PSVSGDAESAEKMDFLVSDDPLPDEQVSNMIDGERRRVWLASALKHLNEREMKIISARRL
AEDGATLEELGADLGISKERVRQIESRAMEKLRSALVSADPHMAAYA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatgtctgcagatcggcgcatgatcaaaatcgcgatggccgccccctatctc
gcccgtcaggaagagcacgatctcgccacccgctggaaagatcacgacgatcgcggtgcg
cgcaaccaaatcgccatggcgcatatgcgcctggttatctccatggccggcaagttccgc
aatttcggtctgccgatgagcgacctcgtgcaagagggctatgtcggtctgctggaggcc
gccgcgcgtttcgaaccggaacgggacgtgcgcttttcgacctatgccagctggtggatc
agggcgtcgatccaggattatatcctgcgcaactggtcgatcgtgcgcggcggcaccagt
tcggcgcagaaggcgctgttcttcaatctgcgccgcctgcgcgccaaactcgccaggggc
gatacgcagttgacgctgcaatccattcatcaggaaatcgccgcagccctcggcgtcagc
cttgccgatgtgcagaccatggatgccaggctttccggcaacgacgcttcgctccaggcg
ccttccgtctccggcgatgccgagagcgcggagaagatggattttctcgtcagcgacgat
ccgctgccggacgagcaggtttccaatatgatagacggcgagcgccgccgcgtctggctc
gcttcggcgctgaaacatctcaacgaacgcgagatgaagatcatcagcgcccggcgcctg
gcggaagacggcgccacgctcgaagagctcggcgccgatctcggcatttcgaaggagcgc
gtgcgccagatcgaaagccgggcgatggaaaagcttcgcagcgcgctggtcagcgccgat
ccgcatatggcagcctacgcgtga
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