KEGG   Rhizobium etli bv. mimosae Mim1: REMIM1_PC00229
Entry
REMIM1_PC00229    CDS       T02778                                 
Name
(GenBank) DNA-binding HU-like protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rel  Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:rel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rel03032]
    REMIM1_PC00229
   03036 Chromosome and associated proteins [BR:rel03036]
    REMIM1_PC00229
   03400 DNA repair and recombination proteins [BR:rel03400]
    REMIM1_PC00229
DNA replication proteins [BR:rel03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    REMIM1_PC00229
Chromosome and associated proteins [BR:rel03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    REMIM1_PC00229
DNA repair and recombination proteins [BR:rel03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      REMIM1_PC00229
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG SSPI
Other DBs
NCBI-ProteinID: AGS24582
LinkDB
Position
pRetNIM1c:complement(238101..238379)
AA seq 92 aa
MTTTNEIADKIASDHGLTKVQGKAIVEAVFAAITDAATSGAETSIPGFGKFKVKDTPERE
GRNPSTGAAIKVAAARKLGFQPAKALKDALNT
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaccacgacaaatgaaatcgctgacaagatcgcgtcagaccacggcctgacgaaggtg
cagggaaaggcgatcgtcgaagctgtatttgcggcgatcacggacgctgccacctccggc
gccgagacgtccattcccggcttcgggaaattcaaggtgaaggataccccggagcgcgaa
ggccgcaatccgtcgacgggagcggcgatcaaggttgctgcggcaagaaagctcggcttc
cagcctgccaaggctctgaaggacgccttgaacacgtaa

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