KEGG   Rhizobium etli bv. mimosae Mim1: REMIM1_PC00254
Entry
REMIM1_PC00254    CDS       T02778                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
rel  Rhizobium etli bv. mimosae Mim1
Pathway
rel02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rel00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    REMIM1_PC00254 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rel02044]
    REMIM1_PC00254 (trbF)
Secretion system [BR:rel02044]
 Type IV secretion system
  Trb secretion system protein
   REMIM1_PC00254 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AGS24607
UniProt: S5SRI4
LinkDB
Position
pRetNIM1c:complement(257861..258523)
AA seq 220 aa
MAANRAPENPYLAARQEWNERYGSYVRSASAWRIVGILGLTMAVIGFGYAMYLSTQVKLV
PYIVEVDKLGTAVTSGYPQQIEYADVRVVRATLGNFVTSFRSITPDAVVQKQYIDRTYAL
LRTSDPSTEKINAWFRGNSPFEKAKSSTVAIEVNNIVALSNQTYQIDWTEYERDRKGKEI
GTRRFRGIATVTLTAPQDEATIRLNPIGLYVRDFDWTAQL
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagcgaaccgcgcccccgaaaacccctatcttgccgcgcgccaggaatggaacgag
cgatatggttcctacgttcggtccgcctccgcatggcgcatcgtcggcattctcggtttg
accatggccgtgatcggctttggatatgcgatgtatctgagcacccaggtcaagttggtt
ccctatatcgtcgaggtcgacaaactcggaaccgcggtgacatcaggctatcctcaacag
atcgaatatgccgatgttcgggtggtgcgcgcgacgctcgggaatttcgtcaccagcttc
cgttcgatcacgcctgatgccgtcgtgcagaagcagtatatcgatcgaacctacgctctc
cttcgaacatcggatccctcgaccgagaagatcaacgcctggttccgcggtaactcaccg
ttcgaaaaggcgaagtcttcgacggttgcgatcgaggtcaacaatatcgtggcgctgtcg
aaccagacctatcagatcgactggaccgaatacgaacgcgaccgcaagggcaaggaaatc
ggcacgcgtcggtttcgcggaatcgcaacggtgacactcaccgcgccgcaggacgaggcg
actatccgcctcaatccgatcggcctctatgtccgggatttcgactggacagcacagctt
taa

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