KEGG   Rhizobium etli bv. mimosae Mim1: REMIM1_PC00257
Entry
REMIM1_PC00257    CDS       T02778                                 
Symbol
trbJ
Name
(GenBank) conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
rel  Rhizobium etli bv. mimosae Mim1
Pathway
rel02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rel00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    REMIM1_PC00257 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rel02044]
    REMIM1_PC00257 (trbJ)
Secretion system [BR:rel02044]
 Type IV secretion system
  Trb secretion system protein
   REMIM1_PC00257 (trbJ)
SSDB
Motif
Pfam: Spc29 DUF2749 MCPsignal Leptin EspB_PE Fib_alpha
Other DBs
NCBI-ProteinID: AGS24610
UniProt: S5S402
LinkDB
Position
pRetNIM1c:complement(259914..260717)
AA seq 267 aa
MPHRCSTSNRLLAGLAAVVLMAGTVVPANAGTATGAATEWTQVLNNGELVSLVGQSGEQI
QNQLTQISQLAQQIETQLNIYQNLLQNTATLPSHMWGQVESDLNQLRSIVDQGQSISFSM
GNADDVLQQRFQSYSSLKTNLPDNASFSSTYQSWSDTNRDTIASTLKAASLTADQFDSEE
GTMSSLRSMSETADGQMKALQVGHEIAAQQVAQMQKLRGLVSQQMTMMGTWLQTEQTDKD
LAQARREKFFNAEVKSIPEGQKMEPRW
NT seq 804 nt   +upstreamnt  +downstreamnt
atgccgcatcgctgctcaacttcgaatagattgctcgctggtctggcggcagtcgtattg
atggccggcactgtcgtgcccgcgaatgccggaactgccacgggggccgcaaccgaatgg
acgcaggttctcaacaatggcgagctcgtatcgcttgttggccaatctggcgagcaaatc
cagaaccagctcactcagatcagtcagctggcgcaacagatcgaaacccagctcaatatc
taccagaacctgctgcagaacaccgcgacgcttccatcgcatatgtgggggcaggtcgaa
agcgatctcaaccagcttcgcagcatcgtcgaccagggccagagcatttcattttccatg
ggcaatgccgacgatgtgctgcagcagcgcttccagagctattccagtctcaagaccaat
ctgcctgacaatgcttccttttcgagcacataccagtcctggtcggacaccaaccgggac
acgatcgcgagcacgctgaaggcagcaagtctaacggcggatcagttcgatagcgaggaa
ggcacgatgtcttcactgcggtccatgtccgaaaccgctgacgggcagatgaaagccctg
caggtcggacatgagatcgccgcgcagcaagttgcccagatgcagaagcttcgcggcctc
gtctcccaacagatgacaatgatgggaacctggcttcagactgagcagaccgacaaggac
ttggcgcaggcgcgccgggagaagttcttcaatgccgaggtgaagagcatccccgaaggt
caaaagatggagccccgctggtga

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