Rhizobium etli bv. mimosae Mim1: REMIM1_PD00057
Help
Entry
REMIM1_PD00057 CDS
T02778
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00362
Benzoate degradation
rel01100
Metabolic pathways
rel01120
Microbial metabolism in diverse environments
rel01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
REMIM1_PD00057 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
REMIM1_PD00057 (pcaH)
Enzymes [BR:
rel01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
REMIM1_PD00057 (pcaH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
AGS24674
LinkDB
All DBs
Position
pRetMIM1d:complement(71014..71763)
Genome browser
AA seq
249 aa
AA seq
DB search
MSERANSKPETGAFFARDRAWHAPALTPGYKTSVLRAPQRALLSLDGTISEITGPVFGHS
MIGELDNDLILNYARPGESAIGERIIVHGRVLDERAKPVAGALVEFWQANAGGRYRHKKE
TYLAAIDPNFGGCGRAITDEEGRYHFRTVRPGAYPWPNGVNDWRPAHIHFSIFGHGFAQR
LITQMYFEGDPMIWKCPIVGTIPDKAAIEQLIAPLDWSNTIPMDSRAYKFDIVLRGRRST
MFENRLEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgagcaaacagcaagccggagaccggcgccttcttcgcccgcgaccgagcc
tggcacgcgccggcgctgaccccaggctacaaaacctcggtgctgcgcgcgccgcagcgc
gcgctgctgtcgctcgacggcacgatctccgaaatcacaggtccggtcttcggccattcg
atgatcggcgaactcgacaacgacctgatcctgaactatgcgcgccccggtgaaagcgcc
atcggcgaacgcatcatcgtccacggccgcgtgctcgacgagcgggcaaagcctgtggcc
ggcgccctggtcgaattctggcaggccaatgctggcggccgctaccgccacaagaaggaa
acctatctggcggcgatcgacccgaatttcggcggctgcggccgcgccatcaccgacgag
gaaggccgctaccatttccgcaccgtacggccgggcgcctatccctggccgaacggcgtc
aacgactggcgccccgcccatatccacttctcgatcttcgggcacggctttgcccagcgc
ctgatcacccagatgtatttcgagggcgatccaatgatctggaaatgtccgatcgtcggc
acgatcccggacaaggcggcgatcgagcagctgatcgcgccgctcgactggagcaatacg
attccgatggattcacgcgcttataaattcgatatcgtgctgcgcggccgccgctcgacg
atgttcgaaaacaggctggagggcaactga
DBGET
integrated database retrieval system
